PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10274g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 415aa MW: 47321.3 Da PI: 8.4596 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.8e-20 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa+a+++a++k++g MA_10274g0010 85 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAARAYDNAALKFRG 134 8********.**********94....45*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 7.23E-36 | 84 | 143 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 3.2E-33 | 85 | 143 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 25.712 | 85 | 142 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-23 | 85 | 143 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 7.0E-39 | 85 | 148 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-13 | 85 | 134 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.8E-12 | 86 | 97 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.8E-12 | 108 | 124 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence Send to blast |
MASKTDQLVS GQKRRRDEQQ VTTFTAHCFK ADDITCQPFA VSSSEEVPSI IVPHQHQQRI 60 PAEDSTSWKR KDELPQAQNT PKKKRYRGVR QRPWGKWAAE IRDPKKAARV WLGTFETAED 120 AARAYDNAAL KFRGSRAKLN FPERINLQDE DHLGVNITKN EIAAITNFSG QVPPVTSTTF 180 LPTHYNNLSA PTECRRSVRV ERMSGAAFFD PQHYENPSQQ FIRTDSTCLS QFSDAYHYAQ 240 LQHNPGFTCL SQFSDPYHYA QLLHNPGFHA EQANSYPNLL QQYSANIRSQ QQLEPCSHQL 300 PSITSIQNHP GLDYNRQVQI TRKPTLVSST YTGARPSIFN NYVQQQQQQH MFIQQQRGPS 360 ISTTGYEELS SLRGRSTDQT SGNSLVSAES QYEFSNNSDY NSVIHRAHNW HCPDL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 5e-28 | 82 | 146 | 2 | 67 | ATERF1 |
3gcc_A | 5e-28 | 82 | 146 | 2 | 67 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 84 | KRKDELPQAQNTPKKKR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A9P288 | 1e-130 | A9P288_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 2e-28 | ERF family protein |