PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10266929g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 167aa    MW: 18397 Da    PI: 10.1816
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10266929g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like925.1e-2948102155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+ l+Wtp+LH++Fvea++qLGG+++ tPk ++++m+v+gLt++hvk HLQkYR+
  MA_10266929g0010  48 KQWLHWTPDLHDQFVEAISQLGGADRVTPKGVRKMMGVQGLTIYHVKIHLQKYRI 102
                       56799*************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.99E-1646102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-2646103IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-2148103IPR006447Myb domain, plants
PfamPF002499.9E-853101IPR001005SANT/Myb domain
PfamPF143791.7E-11134157IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MFQNKKFSTD GLVPQRFHGS EQRGAGPLGV TSSSSGSLVT SGGSGSTKQW LHWTPDLHDQ  60
FVEAISQLGG ADRVTPKGVR KMMGVQGLTI YHVKIHLQKY RIAKYIPESL EGGKSGKKKG  120
NKIVSNLEAI SGTQIVEALQ MQMEVQKRLH EQLEVQHYYS IYIASAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-2348105259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1080561e-165BT108056.1 Picea glauca clone GQ03116_F08 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024360639.13e-56protein PHOSPHATE STARVATION RESPONSE 1-like
SwissprotQ9SJW06e-46PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2K1KZM97e-55A0A2K1KZM9_PHYPA; Uncharacterized protein
STRINGPP1S226_24V6.11e-55(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-43G2-like family protein