PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10266929g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | G2-like | ||||||||
Protein Properties | Length: 167aa MW: 18397 Da PI: 10.1816 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92 | 5.1e-29 | 48 | 102 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+ l+Wtp+LH++Fvea++qLGG+++ tPk ++++m+v+gLt++hvk HLQkYR+ MA_10266929g0010 48 KQWLHWTPDLHDQFVEAISQLGGADRVTPKGVRKMMGVQGLTIYHVKIHLQKYRI 102 56799*************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 6.99E-16 | 46 | 102 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.0E-26 | 46 | 103 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-21 | 48 | 103 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.9E-8 | 53 | 101 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.7E-11 | 134 | 157 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MFQNKKFSTD GLVPQRFHGS EQRGAGPLGV TSSSSGSLVT SGGSGSTKQW LHWTPDLHDQ 60 FVEAISQLGG ADRVTPKGVR KMMGVQGLTI YHVKIHLQKY RIAKYIPESL EGGKSGKKKG 120 NKIVSNLEAI SGTQIVEALQ MQMEVQKRLH EQLEVQHYYS IYIASAI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 7e-23 | 48 | 105 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-23 | 48 | 105 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-23 | 48 | 105 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-23 | 48 | 105 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-23 | 48 | 105 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT108056 | 1e-165 | BT108056.1 Picea glauca clone GQ03116_F08 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024360639.1 | 3e-56 | protein PHOSPHATE STARVATION RESPONSE 1-like | ||||
Swissprot | Q9SJW0 | 6e-46 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A2K1KZM9 | 7e-55 | A0A2K1KZM9_PHYPA; Uncharacterized protein | ||||
STRING | PP1S226_24V6.1 | 1e-55 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP78 | 17 | 262 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-43 | G2-like family protein |