PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MA_101849g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 306aa MW: 35123.5 Da PI: 7.6888 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.1 | 2.4e-42 | 21 | 146 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrF Pt+eel+++y+kkk+++ + l+++++i+++d+y+++Pw+Lp +++a+e++w+fF++r +++ r+nr + sgyWkatg+d++v ++ MA_101849g0010 21 PGFRFYPTEEELLSFYMKKKIQAGHsLNFDKIIPTMDLYQYDPWELPgFAHDAGEQQWFFFVPRYHNK--RARPNRLAVSGYWKATGSDRAVRNE 113 9*******************998886888888***************768888999*******98865..57****99****************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfykg++p g+ktdW+m+eyr+ MA_101849g0010 114 LLQCIGLKKILVFYKGKSPYGQKTDWIMNEYRM 146 9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.11E-44 | 16 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 49.214 | 19 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-22 | 21 | 146 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence Send to blast |
MAMPDKICND GVVQGELMDL PGFRFYPTEE ELLSFYMKKK IQAGHSLNFD KIIPTMDLYQ 60 YDPWELPGFA HDAGEQQWFF FVPRYHNKRA RPNRLAVSGY WKATGSDRAV RNELLQCIGL 120 KKILVFYKGK SPYGQKTDWI MNEYRMPEFS SSAPKKKMDM VLCRIYRKTA TRKSLEQRAK 180 TNGVDKEEPV VSSDVYEDKS HSLTVDVRCL SNPMIEAKVS SVQYLDDEGV CSSRSKTKDE 240 SSLFDCLEPI MFCEDEETTV LKTSKPKACK PPQLELPKLP MDFLFGQQIT TPYALLATPS 300 PFQIPL |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-42 | 21 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-42 | 21 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-42 | 21 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-42 | 21 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 7e-42 | 21 | 171 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 7e-42 | 21 | 171 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 7e-42 | 21 | 171 | 19 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Swissprot | Q10S65 | 2e-54 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A075M5N5 | 1e-130 | A0A075M5N5_9SPER; NAC domain protein | ||||
STRING | XP_008791987.1 | 8e-58 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 3e-54 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
---|---|---|---|
|