PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_101135g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 327aa    MW: 36991.7 Da    PI: 8.2821
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_101135g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.22.4e-11291315125
                     ---SS-EEEEEEE--TT-SS-EEEE CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYY 25 
                     ldDgy+WrKYGqK+vk++++pr+ +
  MA_101135g0010 291 LDDGYKWRKYGQKVVKNTHHPRHVF 315
                     59********************865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-13276315IPR003657WRKY domain
SuperFamilySSF1182905.23E-10283314IPR003657WRKY domain
PROSITE profilePS5081112.863286327IPR003657WRKY domain
SMARTSM007742.4E-4291326IPR003657WRKY domain
PfamPF031065.5E-8292318IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MTASVASLSP LSLYSQANIS FILQVPNIPL LFSSLLFSAL YRSLGLGFES QQEDKCKRRW  60
KGHDLVCSDR SQLPRLVVAL TANMPESYGQ INPFVSAECM QGYFLTRPQH ELVHSMHSFQ  120
ETFHERSGVP EGELQPSNFA SQSDNSDYCF LRPSQLKLSG NGEYPAFSNR VSQDQALLIN  180
STEYNDSQRG LISSPLGHAA DQVSFSCTDT ISHMDYRTNL PEISLLRSTD DQSFDSSVQE  240
NAKRTEGLKN LSNLWWGASS SCDVKMKKVK VRRKLREPRF CFQTMSDVDV LDDGYKWRKY  300
GQKVVKNTHH PRHVFILSAA RTTLKLT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1269275KVRRKLR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1195600.0BT119560.1 Picea glauca clone GQ04107_D16 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5AE581e-160D5AE58_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.11e-20WRKY family protein