PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10031781g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 237aa    MW: 26230.1 Da    PI: 6.9508
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10031781g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19136187256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+++AeIrdp++ g  +r++lg+f taeeAa a+++a+ +++g+
  MA_10031781g0010 136 HYRGVRQRP-WGKFAAEIRDPTKKG--ARVWLGTFITAEEAALAYDRAAFRIRGA 187
                       7********.**********97744..*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-31135194IPR001471AP2/ERF domain
PfamPF008476.3E-13136186IPR001471AP2/ERF domain
PROSITE profilePS5103223.868136194IPR001471AP2/ERF domain
CDDcd000187.77E-30136194No hitNo description
SMARTSM003803.5E-37136200IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-22136195IPR016177DNA-binding domain
PRINTSPR003671.3E-10137148IPR001471AP2/ERF domain
PRINTSPR003671.3E-10160176IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MEINRYSCDW PESTKETMNM LELIRHHLLE LEDELDIIDL DPVGENHPSS ISFSPAVVAS  60
GSKWDYIHAT ASGSCQNSGS RSTSEDNENE FTQRSSSSTS SESAVIRREE AVNVKVKPQA  120
HEEESVKMKQ MSSARHYRGV RQRPWGKFAA EIRDPTKKGA RVWLGTFITA EEAALAYDRA  180
AFRIRGAKAL VNFPLALDSN SENGSAVGHM AHKRKRGKEE TAEERAACSR KGCGSGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-34132199168ATERF1
3gcc_A9e-34132199168ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008436974.13e-35PREDICTED: ethylene-responsive transcription factor ERF105
RefseqXP_026432908.15e-35ethylene-responsive transcription factor 1-like
TrEMBLA9NMA35e-68A9NMA3_PICSI; Uncharacterized protein
STRINGXP_008436974.11e-34(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-27ERF family protein