PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10027224g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

STAT

Protein Properties

Length: 514aa MW: 57708.6 Da PI: 8.6057

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10027224g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	162.6	8.1e-51	1	100	24	122
STAT 24 lyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfleavskpirCisrsrntr 115 +yad+g++vek+ ddaeapLL+++dGvef+s++rp++ll+GrasfklkisqLsskcdnrLfr++f++p++ +ypfl+++s+pirC+sr+rn+r MA_10027224g0010 1 VYADNGVPVEKPkDDAEAPLLTTFDGVEFPSTERPIRLLHGRASFKLKISQLSSKCDNRLFRVCFDSPNMANYPFLRVFSRPIRCVSRNRNSR 93 8********999*************************************************************************** PP STAT 116 sssltkk 122 + s+t+k MA_10027224g0010 94 TPSVTWK 100 *9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.505.10	3.4E-5	424	464	IPR000980	SH2 domain
SuperFamily	SSF55550	1.08E-7	424	503	IPR000980	SH2 domain
PROSITE profile	PS50001	11.072	427	514	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence Send to blast
VYADNGVPVE KPKDDAEAPL LTTFDGVEFP STERPIRLLH GRASFKLKIS QLSSKCDNRL 60 FRVCFDSPNM ANYPFLRVFS RPIRCVSRNR NSRTPSVTWK KSNASAYQLD ASHSPGTDET 120 TSESPQVNGD SLVHGSIMHA SKIIPPLKRV RAGHEKLSIK IANGNGLLEQ SSDAGGNACS 180 LSSNDISTPS PPQLHKVLLS ASPLGMAHAR SGNGYSGLTI SSPLSLHQPD PLFSINLEAN 240 SEKRREGNTL VSDTEKLHAH VSSTMRHGAS EGAFSDYIVF KYCLENMYNR SIFLKGTIMS 300 RSDQDVADFA ARVSQYTGCH HNGYQILIAK QLIQEGCDLW KLLMRENYPL LWNSVVHQIE 360 KRIMTISRCT RRRFSTQDKE FLRRIAGCGE TVSWEEFDRL WQWLFPVALA LSTPQIGKAW 420 ESLEPKWIEG MISREEAEAF LRTSEGFSRP GSFIIRFPSS RSWPHPDSGA LIASYVGLDY 480 DVHHRLLSLD ERSVLSFLTY LKYMLLELLT IVRL

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence Send to blast

VYADNGVPVE KPKDDAEAPL LTTFDGVEFP STERPIRLLH GRASFKLKIS QLSSKCDNRL  60
FRVCFDSPNM ANYPFLRVFS RPIRCVSRNR NSRTPSVTWK KSNASAYQLD ASHSPGTDET  120
TSESPQVNGD SLVHGSIMHA SKIIPPLKRV RAGHEKLSIK IANGNGLLEQ SSDAGGNACS  180
LSSNDISTPS PPQLHKVLLS ASPLGMAHAR SGNGYSGLTI SSPLSLHQPD PLFSINLEAN  240
SEKRREGNTL VSDTEKLHAH VSSTMRHGAS EGAFSDYIVF KYCLENMYNR SIFLKGTIMS  300
RSDQDVADFA ARVSQYTGCH HNGYQILIAK QLIQEGCDLW KLLMRENYPL LWNSVVHQIE  360
KRIMTISRCT RRRFSTQDKE FLRRIAGCGE TVSWEEFDRL WQWLFPVALA LSTPQIGKAW  420
ESLEPKWIEG MISREEAEAF LRTSEGFSRP GSFIIRFPSS RSWPHPDSGA LIASYVGLDY  480
DVHHRLLSLD ERSVLSFLTY LKYMLLELLT IVRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024357244.1	1e-163	SH2 domain-containing protein A-like
Refseq	XP_024357246.1	1e-163	SH2 domain-containing protein A-like
TrEMBL	A0A2K1IW19	1e-162	A0A2K1IW19_PHYPA; Uncharacterized protein
STRING	PP1S40_125V6.1	1e-162	(Physcomitrella patens)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP5941	16	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	3e-70	SH2 domain protein B