PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10027224g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family STAT
Protein Properties Length: 514aa    MW: 57708.6 Da    PI: 8.6057
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10027224g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT162.68.1e-51110024122
              STAT  24 lyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfleavskpirCisrsrntr 115
                       +yad+g++vek+ ddaeapLL+++dGvef+s++rp++ll+GrasfklkisqLsskcdnrLfr++f++p++ +ypfl+++s+pirC+sr+rn+r
  MA_10027224g0010   1 VYADNGVPVEKPkDDAEAPLLTTFDGVEFPSTERPIRLLHGRASFKLKISQLSSKCDNRLFRVCFDSPNMANYPFLRVFSRPIRCVSRNRNSR 93 
                       8**********999******************************************************************************* PP

              STAT 116 sssltkk 122
                       + s+t+k
  MA_10027224g0010  94 TPSVTWK 100
                       ***9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.103.4E-5424464IPR000980SH2 domain
SuperFamilySSF555501.08E-7424503IPR000980SH2 domain
PROSITE profilePS5000111.072427514IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
VYADNGVPVE KPKDDAEAPL LTTFDGVEFP STERPIRLLH GRASFKLKIS QLSSKCDNRL  60
FRVCFDSPNM ANYPFLRVFS RPIRCVSRNR NSRTPSVTWK KSNASAYQLD ASHSPGTDET  120
TSESPQVNGD SLVHGSIMHA SKIIPPLKRV RAGHEKLSIK IANGNGLLEQ SSDAGGNACS  180
LSSNDISTPS PPQLHKVLLS ASPLGMAHAR SGNGYSGLTI SSPLSLHQPD PLFSINLEAN  240
SEKRREGNTL VSDTEKLHAH VSSTMRHGAS EGAFSDYIVF KYCLENMYNR SIFLKGTIMS  300
RSDQDVADFA ARVSQYTGCH HNGYQILIAK QLIQEGCDLW KLLMRENYPL LWNSVVHQIE  360
KRIMTISRCT RRRFSTQDKE FLRRIAGCGE TVSWEEFDRL WQWLFPVALA LSTPQIGKAW  420
ESLEPKWIEG MISREEAEAF LRTSEGFSRP GSFIIRFPSS RSWPHPDSGA LIASYVGLDY  480
DVHHRLLSLD ERSVLSFLTY LKYMLLELLT IVRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024357244.11e-163SH2 domain-containing protein A-like
RefseqXP_024357246.11e-163SH2 domain-containing protein A-like
TrEMBLA0A2K1IW191e-162A0A2K1IW19_PHYPA; Uncharacterized protein
STRINGPP1S40_125V6.11e-162(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP59411618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.13e-70SH2 domain protein B