PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_23022A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 667aa    MW: 70677.4 Da    PI: 4.2058
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_23022AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.55.8e-13215268558
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                                k+ +rk +NRe+ArrsR R+ a ++eLe+ v+ L  e + L k+l+e ++++++
  Oropetium_20150105_23022A 215 KVKKRKLSNRESARRSRTRRAAHMKELEDQVAHLRVEKSLLLKRLDEVNEKYSA 268
                                889**********************************************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-14211275IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.427213265IPR004827Basic-leucine zipper domain
PfamPF001702.3E-10215267IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.64E-9215265No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-8216267No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
PfamPF124981.3E-11282399IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 667 aa     Download sequence    Send to blast
MESPCFAMDD DDQFPNPMWT LQQPPXXXXX XXXXEVVIVG DDCGGGVVVA HEATTAAEEL  60
MIPSEWSFES LLEEDLMKNT APAGSEQQPP PAGLHIIEPA AAPPGDATAA APAGSGAPDP  120
IEYNAMLKRK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XAVGPPPPPL RANSSSKLSS  180
PHPSFVLPDY HLPGDYDDMD GEVEILGCKM PDLEKVKKRK LSNRESARRS RTRRAAHMKE  240
LEDQVAHLRV EKSLLLKRLD EVNEKYSASA VDNRILRADL ETLRMKVKMA EDTVNRLMGS  300
TSTPSFSNMP FVASPSHANA TPPAVPIQDD NNMITNNYFI TVSDDAVVVN DSSFVPSATA  360
PSPLQAEGVV NGRSSNAVVA SSLCAMAMEL QQNTMSTMPA APAPEVPIQN NNITNNYYTA  420
ASDAGLVSDS SFVPSAVEAP SPLQAEEVVV NGSSNAXXXX XXXXXXXXXX XXXXXXXXXX  480
PPPAVPIQNN NIIINSYTPA SDAGLVNDSS FVPSAAAPSP LQAEGVVNGR SSNAVVASSL  540
CAMAMELQQN TMSTMPAAPY PEVPIQNNNI SNNYYTAASV AGLVNVSSFV PSAAAAAPSP  600
LQAERVVSGS SNAVAAASSH CAMAMAMELQ QITVSTMPAA TAAAGDEAVP LSGLVEVIDD  660
SNMEGH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_23022A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2447846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.13e-21bZIP family protein