PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_22950A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | WRKY | ||||||||
Protein Properties | Length: 240aa MW: 23467.5 Da PI: 8.5109 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 65.5 | 8.5e-21 | 2 | 47 | 15 | 59 |
-TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 15 vkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 kg+++pr+YYrCt+a Cpv+k+v+r+aed++++++tYeg+Hnh+ Oropetium_20150105_22950A 2 AKGNPCPRAYYRCTMAvACPVRKQVQRCAEDKTILITTYEGNHNHP 47 59**************9****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 21.299 | 1 | 49 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.3E-17 | 1 | 48 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.3E-16 | 2 | 47 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 9.1E-20 | 2 | 49 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.12E-16 | 2 | 49 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MAKGNPCPRA YYRCTMAVAC PVRKQVQRCA EDKTILITTY EGNHNHPLPP AATTMANTTS 60 AAAAMLLSGP APSRDGAAAA FLGHGHPAAA LFHHSAAAIP YASTMATLSA SAPFPTITLD 120 LTQAPGTGAG GLHRPPPGGI GIHPAAAAGM PFPTVTAAIA ADPNFTTALA AAISSVMGGG 180 GGGGAAPHHQ TTTPRGNEVV SGEGGTSTTA PPPTTTAAPL AAASASPRFA TQSCTTSTT* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_22950A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008673952.1 | 5e-90 | probable WRKY transcription factor 31 isoform X2 | ||||
Swissprot | Q9XEC3 | 1e-49 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A1D6MRA7 | 6e-88 | A0A1D6MRA7_MAIZE; Putative WRKY transcription factor 47 | ||||
STRING | GRMZM2G327349_P01 | 1e-88 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4358 | 32 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 2e-39 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_22950A |