PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_22474A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 20091.3 Da PI: 11.9678 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.5 | 4.4e-11 | 71 | 116 | 3 | 48 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 el+r rrk++NRe+ArrsR+R++++ eeL++ +++L ae++aL+ + Oropetium_20150105_22474A 71 ELRRLRRKISNRESARRSRARRRQRAEELARAADALRAERRALAAR 116 689***************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-7 | 67 | 116 | No hit | No description |
SMART | SM00338 | 4.2E-6 | 69 | 133 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-7 | 71 | 116 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.979 | 71 | 116 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.56E-6 | 72 | 119 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 76 | 91 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MLSSVVGAEV MHLMDLGLPG MDACFGFDFD FNASTTSCGA TDASSQSQVA TTTTKAGHNN 60 NGGHRDEDMV ELRRLRRKIS NRESARRSRA RRRQRAEELA RAADALRAER RALAARRDAA 120 AARALAVRRD NARLLAEAXX XXXXXXXXNR QSVLLLALAR ARLARTMPAP NPTGVVPSSS 180 MMTL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_22474A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008665488.1 | 4e-12 | ocs element-binding factor 1-like | ||||
TrEMBL | A0A1D6L661 | 1e-10 | A0A1D6L661_MAIZE; Ocs element-binding factor 1 | ||||
STRING | GRMZM2G177046_P01 | 2e-11 | (Zea mays) |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_22474A |