PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_17499A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | ERF | ||||||||
Protein Properties | Length: 183aa MW: 19548.9 Da PI: 8.1116 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.3 | 1.5e-07 | 6 | 26 | 1 | 22 |
AP2 1 sgykGVrwdkkrgrWvAeIrdp 22 ++++GVr+++ +g+Wv+eIr+p Oropetium_20150105_17499A 6 KKFRGVRQRH-WGSWVSEIRHP 26 59*******9.*********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.953 | 7 | 43 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-9 | 7 | 28 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MVQSKKKFRG VRQRHWGSWV SEIRHPLLAT GELAPVPVSR DSRGSSSAAG GSNNNLSQIL 60 SAKLRKCCKT PSPSLTCLRL DPEKSHIGVW QKRAGARADS SWVMTVELNK DAPAASSSEE 120 LTPSSYGAAT TPTSTSTTTD SPQAMDDEER IALQMIEELL GRSGPVDHSH GMLHDGEGSL 180 VI* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_17499A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP092982 | 1e-75 | FP092982.1 Phyllostachys edulis cDNA clone: bphylf034m13, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002438651.1 | 3e-74 | ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q9XI33 | 5e-46 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A1E5W425 | 1e-75 | A0A1E5W425_9POAL; Ethylene-responsive transcription factor WIN1 | ||||
STRING | Pavir.Db01224.1.p | 5e-74 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3717 | 38 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25390.1 | 2e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_17499A |