PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_17443A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 1872aa    MW: 212733 Da    PI: 9.379
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_17443AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.6e-08836857526
                                CHHHCHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                                k  rr+++NReAAr+sR+RKk 
  Oropetium_20150105_17443A 836 KTLRRLAQNREAARKSRLRKKD 857
                                7789****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.40.1504.9E-3538164IPR000008C2 domain
SMARTSM002391.4E-1942138IPR000008C2 domain
SuperFamilySSF495621.19E-3542179IPR000008C2 domain
CDDcd083786.10E-6842166No hitNo description
PfamPF001681.8E-2242144IPR000008C2 domain
PROSITE profilePS5000415.45943123IPR000008C2 domain
Gene3DG3DSA:2.60.40.1501.1E-25172310IPR000008C2 domain
SuperFamilySSF495621.79E-31202355IPR000008C2 domain
PfamPF001681.7E-19202308IPR000008C2 domain
SMARTSM002396.5E-9203301IPR000008C2 domain
CDDcd040192.65E-82203353No hitNo description
PROSITE profilePS5000412.795204286IPR000008C2 domain
Gene3DG3DSA:2.60.40.1508.6E-28360496IPR000008C2 domain
SuperFamilySSF495622.34E-26364497IPR000008C2 domain
PfamPF001684.4E-23364475IPR000008C2 domain
SMARTSM002394.9E-13365472IPR000008C2 domain
CDDcd083791.02E-66365492No hitNo description
PROSITE profilePS500049.391366457IPR000008C2 domain
PfamPF083721.4E-80620775IPR013583Phosphoribosyltransferase C-terminal
Gene3DG3DSA:1.20.5.1701.6E-4831858No hitNo description
PROSITE patternPS000360839854IPR004827Basic-leucine zipper domain
PfamPF141442.1E-24907981IPR025422Transcription factor TGA like domain
Gene3DG3DSA:2.60.40.1502.9E-3011731303IPR000008C2 domain
CDDcd083781.44E-6011781305No hitNo description
SMARTSM002396.8E-1511781276IPR000008C2 domain
SuperFamilySSF495623.42E-3211781318IPR000008C2 domain
PROSITE profilePS5000414.02311791261IPR000008C2 domain
PfamPF001681.1E-1511791282IPR000008C2 domain
Gene3DG3DSA:2.60.40.1502.9E-2213111453IPR000008C2 domain
SuperFamilySSF495621.04E-2413411483IPR000008C2 domain
PfamPF001686.2E-1813411440IPR000008C2 domain
SMARTSM002391.4E-1213421444IPR000008C2 domain
CDDcd040191.03E-6213421481No hitNo description
PROSITE profilePS5000411.71413431429IPR000008C2 domain
Gene3DG3DSA:2.60.40.1503.5E-2714881627IPR000008C2 domain
SuperFamilySSF495621.87E-2614921628IPR000008C2 domain
PfamPF001682.4E-2114921606IPR000008C2 domain
SMARTSM002396.9E-1314931603IPR000008C2 domain
CDDcd083794.79E-6314931623No hitNo description
PROSITE profilePS500049.59814941588IPR000008C2 domain
PfamPF083727.1E-8117161871IPR013583Phosphoribosyltransferase C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005618Cellular Componentcell wall
GO:0005783Cellular Componentendoplasmic reticulum
GO:0009506Cellular Componentplasmodesma
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1872 aa     Download sequence    Send to blast
MMQRPPFRTE EYSLKETSPH LGGTAAGDKL TTTYDLVEQM QYLYVRVVKA KDLPNKDITG  60
SCDPYVEVKL GNYKGTTRHF EKKNNPEWNQ VFAFSKERIQ SSSVEIVVKD KDFLKDDFVG  120
RVVFDLNEVP KRVPPDSPLA PQWYRLEDRH GHKGKGELML AVWMGTQADE AFPEAWHSDA  180
ASVPGDGLAS IRSKVYLTPK LWYLRVNVIE AQDLIPHDRT RFPEVYVKAM LGNQVLRTRS  240
SASRTLNPMW NEDLMFVAAE PFEEHLVLSV ENRVAPGKDE VLGRTIISLH HVPRRLDHKL  300
QNSQWFNLEK HVMVDGEQKK ETKFSSRIHL RICLEGGYHV LDESTHYSSD LRPTAKPLWK  360
PSIGILELGI LTAQGLLPMK TKDGRGTTDA YCVAKYGQKW VRTRTIIDSF TPKWNEQYTW  420
EVYDPCTVIT IGVFDNCHLN GGEKANGARD TRIGKVRIRL STLETDRVYT HSYPLIVLTP  480
AGVKKTGEVQ LAVRFTCSSL LNLMHLYSQP LLPKMHYVHP LSVIQVDNLR RQATNIVSTR  540
LSRAEPPLRK EIVEYMLDVD SHMWSMRKSK ANFFRIMGVL SPLIAVARWF DQICHWRNPL  600
TTILIHILFV ILVLYPELIL PTIFLYLFLI GVWYYRWRPR QPPHVDTRLS HAETAHPDEL  660
DEEFDTFPTS RPPDIVRMRY DRLRSVAGRI QTVVGDLATQ GERLQSLLSW RDPRATALFV  720
TFCFIAAIVL YVTPFRVVVF LAGLYILRHP RFRHKLPSVP LNFFRRLPAR TDSMLRRDPE  780
GYDMPSDLDQ ALLYFDGHQT KPSIQEQLRD AAGGGKRGGA VASSSEQEGP RTPDPKTLRR  840
LAQNREAARK SRLRKKDQAG TSRTGDTDGK NSVHHMLTQT WGDGVRADAA LFNLEYERWL  900
GDHSKVIAQL RAAAEEHRPD GELRAYADEA AAHYGTLMAH KARLAAADPL HLLSGLWKGA  960
AERCLLWIGG FRPSELIKVV LRHVEPLAEQ QAAATCEVQD SARRAEEALD GELGSLLRSL  1020
SEVVSSDPAQ TPPMYGQLYN PADVAGYMGH MHMAIAMDKL AALGTFLRQV NCNSSLSLCH  1080
FIVEFSDMRI HAGMLNDGEM MMQADELRMQ TLQALRQVLT ARQAARCFLK DTNPLLGEQW  1140
PKGAAGPARP SGGGGALAGW LGVDKPSSTY DLVEQMFFLY VRVVKAKDLP PNPITGAAMD  1200
PYVEVRLGNY KGTTRHFDRR PNPEWDQVFA FSKSRVQSNV LEVFLKDREM IGRDDYVGKV  1260
VFDLAEVPTR VPPDSPLAPQ WYRLEDRRGD RKVRGELMLA VWIGTQADEA FPEAWHSDAA  1320
TVRGEGVASV RSKAYVSPKL WYLRVNVIEA QDVQPQSQRG PGGRAPEVFV KAQVGQQILK  1380
TSVVPAPTLN PRWNEDLVFV VAEPFEEQLV LAVEDRVSPQ KNDLLGRVAL PLTLFEKRLD  1440
HRPFVQSRWF DLERRVHLRA CLEGAYHVMD ESTMYISDTR PTARQLWKPP VGVLEVGILG  1500
AYGLQPMKNR DGRGATDAYC VAKYGQKWVR TRTMIGTFNP TWNEQYTWEV FDPCTVITIG  1560
VFDNCHLGTG NGNSGGPPPK DARIGKIRIR LSTLETDRVY THSYPLIVLQ PSGVKKTGEL  1620
RLAVRFTCLS LMNMVHLYTQ PLLPKMHYLH PFTVTQLDAL RMRRSKANFF RAVSLFSGVA  1680
AAARWFNDVC LWKNVATTAL VHVLLLILIW YPELILPTVF LYMFMIGLWN YRRRPRHPPH  1740
MDTKLSWAEA AHPDELDEEF DTFPTSRRQD IVYMRYDRLR SVAGRIQTVV GDMATQGERL  1800
QSLLSWRDPR ATCLFVFFCL IAAIVLYVTP FRVVALVAGL FLLRHPRFRS RLPSVPSNFF  1860
RRLPSRADSM L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1848856RKSRLRKKD
Functional Description ? help Back to Top
Source Description
UniProtPromotes nuclear translocation of the transcription factor OSH1, which directly suppresses the auxin biosynthetic gene YUCCA4 during the late development of anthers (PubMed:29915329). Reduction of auxin levels at late stage of anther development, after meiosis of microspore mother cells, is necessary for normal anther dehiscence and seed setting (PubMed:29915329). Required for jasmonate (JA) biosynthetic genes expression and JA production in anthers (PubMed:29915329). {ECO:0000269|PubMed:29915329}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_17443A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812375.10.0FT-interacting protein 1-like
SwissprotQ60EW90.0FTIP7_ORYSJ; FT-interacting protein 7
TrEMBLA0A2S3HHY80.0A0A2S3HHY8_9POAL; Uncharacterized protein
TrEMBLA0A2T7DWF30.0A0A2T7DWF3_9POAL; Uncharacterized protein
STRINGPavir.Db00755.1.p0.0(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.19e-53bZIP family protein
Publications ? help Back to Top
  1. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  2. Song S, et al.
    OsFTIP7 determines auxin-mediated anther dehiscence in rice.
    Nat Plants, 2018. 4(7): p. 495-504
    [PMID:29915329]