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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Oropetium_20150105_16706A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
GRAS |
| Protein Properties |
Length: 468aa MW: 50185.1 Da PI: 5.402 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_16706A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 305.3 | 1.4e-93 | 67 | 464 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl 83
++lL++cA+a++++d++l+q++L+ l+++a pdgd++qR +a f+ AL ar +r ++ ++ a ++ +s ++++++a++l
Oropetium_20150105_16706A 67 EQLLVHCANAIEANDATLTQQILWVLNNIAPPDGDSTQRQTAAFLCALVARASRtgACKAVMTAAAVAVESAALHAHRFTAVEL 150
79***************************************************9333333333333333333336666666666 PP
GRAS 84 ..fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeele 159
f++++P+++f++ +aN aI+eaveg vH++D++ ++++Q p+L++aLasR+egpp lR+T+ + +++ ++
Oropetium_20150105_16706A 151 agFVDLTPWHRFGYTAANAAIVEAVEGFPVVHVVDLGTTHCMQIPTLIDALASRAEGPPILRLTVADVSSNAnapppaLDMSYD 234
99***************************************************************9887777789887778899 PP
GRAS 160 etgerLakfAeelgvpfefnvl.......vakrledleleeLrvkp..gEalaVnlvlqlhrll............desvsles 222
e+g +L +fA++ +v ++f+v+ +a+ +++l++++L + Eal+Vn+++ lh ++ +++vs
Oropetium_20150105_16706A 235 ELGAKLVSFARSRNVAMDFRVVpaspadaLASLVDQLRVQQLVSDGtaTEALVVNCHMLLHAVPdetagsvlssnlNQPVS--- 315
**********************77655544555555566666444388****************55555555443333333... PP
GRAS 223 erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerr 306
r+ +Lk ++ l P +vvv+e++ad ++++ ++r+ a+++++ +d++++ lpr se+r+++E+e +g++++nv+a+eg +r+
Oropetium_20150105_16706A 316 LRTMLLKSIRALDPALVVVAEEDADFTAGDVVARLRAAFNFMWIPYDAVDTFLPRGSEQRRWYEAE-VGWKVENVLAQEGVDRV 398
5679**************************************************************.***************** PP
GRAS 307 erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
er+e ++W +r++ aGF+pv++se+aa++++ +l++++ g+ ++ e++ lvl+Wk++++v++SaW
Oropetium_20150105_16706A 399 ERQEDRARWGQRMRGAGFRPVAFSEEAAAEVRVMLQEHA-AGWGMKREEDDLVLTWKGHNVVFASAW 464
***************************************.88899999999**************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MQFTHTAPPP PPLHPNNGHG ALGLGLYLDV VGGAPRAWSG SSFPRAAPLS SSKQISLGNL 60
NSTSCMEQLL VHCANAIEAN DATLTQQILW VLNNIAPPDG DSTQRQTAAF LCALVARASR 120
TGACKAVMTA AAVAVESAAL HAHRFTAVEL AGFVDLTPWH RFGYTAANAA IVEAVEGFPV 180
VHVVDLGTTH CMQIPTLIDA LASRAEGPPI LRLTVADVSS NANAPPPALD MSYDELGAKL 240
VSFARSRNVA MDFRVVPASP ADALASLVDQ LRVQQLVSDG TATEALVVNC HMLLHAVPDE 300
TAGSVLSSNL NQPVSLRTML LKSIRALDPA LVVVAEEDAD FTAGDVVARL RAAFNFMWIP 360
YDAVDTFLPR GSEQRRWYEA EVGWKVENVL AQEGVDRVER QEDRARWGQR MRGAGFRPVA 420
FSEEAAAEVR VMLQEHAAGW GMKREEDDLV LTWKGHNVVF ASAWAPL*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
