PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_10751A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 361aa    MW: 40310.1 Da    PI: 9.8449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_10751AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.55.1e-072272521742
                                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeN 42 
                                A+rsR RK+++i+eLe++v++L++e 
  Oropetium_20150105_10751A 227 AQRSRVRKLQYIAELERRVQSLQTEG 252
                                89********************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-5216275IPR004827Basic-leucine zipper domain
CDDcd147038.69E-16217267No hitNo description
SuperFamilySSF579596.75E-6226269No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-7227269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MMANGRLQKQ ALLPPRSPXX XXXXXXXXAP APHTELGGLG PIARPRDAHH RHGHQRTSSE  60
SFLVDEQPSW LDDLLDEPET PARPHGRPGH RRSSSDSFTL FDGGAAAGMY DNPLDGRRAG  120
GQLASWTGAP EFFPDPTSFG RQQGRPWESK QMYRQGGGLP IPAREKNGGR HGPGPSSAFG  180
DHEHGSVPNG VDRKGHGDTA LDQRKEGVNL RHSQSEADTK RAKQQYAQRS RVRKLQYIAE  240
LERRVQSLQT EGIEVSAEMD FLGQQNIMLD LENKALKQRL ESLSQEHLIK RYQQEMFERE  300
ISRLRSLFQQ QQHQPQHAPQ QPAPTHNRSN SRDLDSQFAS LSLKHSDPNS GRDAVSGLRI  360
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_10751A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002441963.20.0uncharacterized protein At4g06598
TrEMBLA0A1B6PC570.0A0A1B6PC57_SORBI; Uncharacterized protein
STRINGGRMZM2G024851_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-59bZIP family protein