PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_04746A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | EIL | ||||||||
Protein Properties | Length: 209aa MW: 21603.6 Da PI: 6.9573 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 34.6 | 3.8e-11 | 94 | 135 | 143 | 182 |
HHHHHHHHHSSSSSS-TTS--TTT--HHH..H---S--HHHH CS EIN3 143 tlgSLLsalmqhcdppqrrfplekgvepP..WWPtGkelwwg 182 tl LLsalm c pp r+ g pP WWPtG+elww Oropetium_20150105_04746A 94 TLARLLSALMASCRPPLRQQDARVGGGPPprWWPTGSELWWV 135 7888************777666665444445**********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 2.1E-13 | 82 | 136 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.29E-12 | 85 | 136 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 4.4E-10 | 87 | 138 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MPAQVKVGAH DGLQVPGVVA ASAPKVMTGV ATAAPLVLAH AGGQLVQVPV RFYGYASVAS 60 GGGATKDAAA PSSRAAVVTL LPLAAALDRF HSMTLARLLS ALMASCRPPL RQQDARVGGG 120 PPPRWWPTGS ELWWVPDVPT NRDYRDTGAV VFPTSDLMDQ QLEDMLIQWP VNEAGGDDDL 180 HKLVASGFGK KTNKLSGAAA TQGTSGEE* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_04746A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15037 | 8 | 18 |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_04746A |