PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_04318A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | bZIP | ||||||||
Protein Properties | Length: 351aa MW: 37890.3 Da PI: 9.7619 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.8 | 1.3e-14 | 270 | 321 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.eleelkke 55 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k ++e+l+k+ Oropetium_20150105_04318A 270 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNEELQKkQVEMLEKQ 321 79*************************************9964156777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-14 | 261 | 330 | No hit | No description |
SMART | SM00338 | 2.8E-13 | 266 | 331 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.001 | 268 | 333 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.18E-10 | 270 | 316 | No hit | No description |
CDD | cd14707 | 9.25E-25 | 270 | 322 | No hit | No description |
Pfam | PF00170 | 9.2E-13 | 270 | 321 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 273 | 288 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0010187 | Biological Process | negative regulation of seed germination | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048316 | Biological Process | seed development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence Send to blast |
MEFPGRSGRR QQPQPEENLP PMTPLPLARQ GSVYSLTFDE FQSALGGPNK DFGSMNMDEL 60 LRSIWTAEES QAVGASNAVD AAADQAAARG NAIQRQGSLT LPRTLSQKTV DEVWRDMMCF 120 GGPSAATAAA APAPATQRQP TLGEITLEEF LVRAGVVRED MTAGQPTPPI QAPAPPAPPQ 180 PMSQPQMLFP QGNVFAPLVP PPLSLGNGLV TDGGGAAAST LSPVMPGTSN GFGKMDGGDM 240 SSLSPSPVPY VFNGGLRGRK PSAMEKVVER RQRRMIKNRE SAARSRQRKQ AYMMELEAEV 300 AKLKELNEEL QKKQVEMLEK QKNEALERMT RQVGPMAKRI CLRRTLTGPW * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00294 | DAP | Transfer from AT2G36270 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_04318A |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025799480.1 | 1e-172 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 1e-157 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A2S3GTZ2 | 1e-171 | A0A2S3GTZ2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J00256.1.p | 1e-161 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.3 | 7e-41 | ABRE binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_04318A |