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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Oropetium_20150105_01574A |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family |
LFY |
Protein Properties |
Length: 385aa MW: 41992.8 Da PI: 8.3699 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Oropetium_20150105_01574A | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 523.2 | 1.1e-159 | 1 | 373 | 1 | 385 |
FLO_LFY 1 mdpea.fsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmk 82
mdp++ fsa+ f+wd ppa++ a + rele+l+ +yGvr +tva+i+elGft+stL++m+
Oropetium_20150105_01574A 1 MDPNDaFSAAhPFRWDLG-----PPAHAXXXXXXXXXX--XXXLLAPPASRELEDLVAGYGVRPSTVARISELGFTASTLLGMT 77
777654776559****63.....333443333333333..34455556689********************************* PP
FLO_LFY 83 deelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsgge 166
++eldd+m++l+ +fr+d+++Ger+G++aa+raer r+++ r ++ ++lda+sqe+ls+e++ agsgg+
Oropetium_20150105_01574A 78 ERELDDMMAALTGLFRWDVMLGERFGLRAALRAERGRVTSLG-GGPRF-----QNGSSLDAASQEVLSDERDV-----AGSGGM 150
***************************************977.33343.....46789***********9874.....566555 PP
FLO_LFY 167 glgeaelvaaeekkseeekkkaskkkqkrkkkkelkse.......ededeeeeededeegsgedgeerqrehPfivtepgevar 243
e++ + k++++k a+++k ede+e+ +d+ e+++g g erqrehPf+vtepgevar
Oropetium_20150105_01574A 151 ADDETGGRRLMAGKKQANKGGATTRKGXXXXXXX---XxxpldvlEDENEDLGSDSTESSAGGVGGERQREHPFVVTEPGEVAR 231
5555444444433333333333222222222222...122455668888888889999999999******************** PP
FLO_LFY 244 gkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafk 327
+kknGLDYLf+LyeqCr fLlqvq+iak G+k+Ptkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLd easnalrra+k
Oropetium_20150105_01574A 232 AKKNGLDYLFHLYEQCRVFLLQVQTIAKMGGHKSPTKVTNQVFRYAKKCGASYINKPKMRHYVHCYALHCLDAEASNALRRAYK 315
************************************************************************************ PP
FLO_LFY 328 ergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385
+rgenvGawrqacy+plv+iaar+g+didavf+ahprLsiWYvPt+LrqLCh++r +
Oropetium_20150105_01574A 316 ARGENVGAWRQACYAPLVEIAARHGFDIDAVFAAHPRLSIWYVPTRLRQLCHQARGGH 373
******************************************************9766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MDPNDAFSAA HPFRWDLGPP AHAXXXXXXX XXXXXXLLAP PASRELEDLV AGYGVRPSTV 60 ARISELGFTA STLLGMTERE LDDMMAALTG LFRWDVMLGE RFGLRAALRA ERGRVTSLGG 120 GPRFQNGSSL DAASQEVLSD ERDVAGSGGM ADDETGGRRL MAGKKQANKG GATTRKGXXX 180 XXXXXXXPLD VLEDENEDLG SDSTESSAGG VGGERQREHP FVVTEPGEVA RAKKNGLDYL 240 FHLYEQCRVF LLQVQTIAKM GGHKSPTKVT NQVFRYAKKC GASYINKPKM RHYVHCYALH 300 CLDAEASNAL RRAYKARGEN VGAWRQACYA PLVEIAARHG FDIDAVFAAH PRLSIWYVPT 360 RLRQLCHQAR GGHAAAGLPP PPMF*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-116 | floral meristem identity control protein LEAFY (LFY) |