PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote238051270021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

STAT

Protein Properties

Length: 531aa MW: 59715.8 Da PI: 5.7985

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote238051270021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	171.1	1.9e-53	261	363	18	120
STAT 18 evvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 +vvasLlyad+g++ve++ dae+pLL+++dG+e++s+drp+kl++GrasfklkisqLsskcdnrLfri+f+ p+l kypfl Ote238051270021\|238051270021 261 KVVASLLYADNGIPVENTTDAEPPLLVNCDGIEYASHDRPCKLINGRASFKLKISQLSSKCDNRLFRIMFDAPQLGKYPFL 341 89***************************************************************************** PP STAT 99 eavskpirCisrsrntrssslt 120 ea s pirC+srsr+tr++s t Ote238051270021\|238051270021 342 EANSLPIRCVSRSRSTRTASIT 363 ***************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MSDLSGVVEK DYVLLKNLKV QFRRDDDAGE ADGCFALCFW IYIENCVSYP SAILVQKHPD 60 VTCNVPFLYL DDEKKLKLFP LLFMHKEAPD SDNPIPWREV PCASTEFEFP TKKWVHVGCE 120 GVFCGRHDPW DLKTSLFHLV LLLQEQSLEY IVQEKTNAET WVLRDLMRLH MDGEIVGEKP 180 FTCSFDKDLY AEGLKKLCLT YPDENKDTLH GFVHGLDILF PEAAIKDHYV KDSPLRLTID 240 HSSTSEIEED SDGVWSIVGG KVVASLLYAD NGIPVENTTD AEPPLLVNCD GIEYASHDRP 300 CKLINGRASF KLKISQLSSK CDNRLFRIMF DAPQLGKYPF LEANSLPIRC VSRSRSTRTA 360 SITLRKSSNK TYYGNGCESP SLDDGSMQLM TNIVREAKLS PSSKRIKLGQ DVPLVMIKEA 420 RQASKVHHPH AWTVNQDDNA HAMSIKRRPE DYCGTENNSC ASDNSEATNS DPKSVLSVSS 480 PISDLIIFQY CLGGPAERCH LLKEIAISTT EEQLTHFANQ VSLFSGCSHH R

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MSDLSGVVEK DYVLLKNLKV QFRRDDDAGE ADGCFALCFW IYIENCVSYP SAILVQKHPD  60
VTCNVPFLYL DDEKKLKLFP LLFMHKEAPD SDNPIPWREV PCASTEFEFP TKKWVHVGCE  120
GVFCGRHDPW DLKTSLFHLV LLLQEQSLEY IVQEKTNAET WVLRDLMRLH MDGEIVGEKP  180
FTCSFDKDLY AEGLKKLCLT YPDENKDTLH GFVHGLDILF PEAAIKDHYV KDSPLRLTID  240
HSSTSEIEED SDGVWSIVGG KVVASLLYAD NGIPVENTTD AEPPLLVNCD GIEYASHDRP  300
CKLINGRASF KLKISQLSSK CDNRLFRIMF DAPQLGKYPF LEANSLPIRC VSRSRSTRTA  360
SITLRKSSNK TYYGNGCESP SLDDGSMQLM TNIVREAKLS PSSKRIKLGQ DVPLVMIKEA  420
RQASKVHHPH AWTVNQDDNA HAMSIKRRPE DYCGTENNSC ASDNSEATNS DPKSVLSVSS  480
PISDLIIFQY CLGGPAERCH LLKEIAISTT EEQLTHFANQ VSLFSGCSHH R

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011082815.1	0.0	uncharacterized protein LOC105165486
TrEMBL	A0A4D8Z7X7	0.0	A0A4D8Z7X7_SALSN; Uncharacterized protein
STRING	Migut.M00685.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9394	23	25