PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote238045830041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24683.8 Da PI: 8.2055 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.3 | 5.6e-08 | 14 | 59 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRd++N+ f eL ll ++ K +K +i + +++ +k+L Ote238045830041|238045830041 14 KADREKLRRDKLNEHFLELGNLLDPD----RAKSDKGSIITDTIQVLKDL 59 678********************997....79**************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.335 | 9 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.88E-8 | 10 | 64 | No hit | No description |
SuperFamily | SSF47459 | 4.97E-12 | 10 | 76 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-11 | 11 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.8E-6 | 13 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.3E-7 | 15 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MEVNNTVSTK KVIKADREKL RRDKLNEHFL ELGNLLDPDR AKSDKGSIIT DTIQVLKDLN 60 CEVKKLKTDH EVLCEESREL TQEKNELREE KASLKSTIQD LKAQQHQRTQ GFMVPWDSSI 120 LMVPSFPFPV AVSVPPGSVP ARPLPSYVNQ YSATSTFIPY TTASTSYVSR PRVSSASSIN 180 QQRSSTSITG NSDDIASDLE LKIPGSAPPK GLPTREKGKQ EE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021815506.1 | 3e-64 | transcription factor bHLH121-like | ||||
Refseq | XP_021815513.1 | 3e-64 | transcription factor bHLH121-like | ||||
Swissprot | Q9LT23 | 2e-47 | BH121_ARATH; Transcription factor bHLH121 | ||||
TrEMBL | A0A0H3YC44 | 1e-81 | A0A0H3YC44_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | EMJ06100 | 1e-63 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA24839 | 2 | 2 |
Publications ? help Back to Top | |||
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