PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote237990030051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ARR-B | ||||||||
Protein Properties | Length: 504aa MW: 56173.8 Da PI: 5.6041 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.5 | 8.3e-25 | 192 | 246 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr +Wt+e+He+F+ ave+LGG++ A P i+++m+v+gL++ehv+SHLQkYRl Ote237990030051|237990030051 192 RPRFNWTNEMHEKFLIAVESLGGPKPAYPNMIVKHMGVPGLSREHVASHLQKYRL 246 59****************************************************8 PP | |||||||
2 | Response_reg | 26 | 4.7e-10 | 27 | 108 | 1 | 82 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekd.pDlillDiempgmdGlellkeireeepklpiivvt 78 +l+v D+++ ++ ++++l++ y +v ++ + +al+ + k+ d +Dl+++ +++Gl+++++i+++ kl+++ ++ Ote237990030051|237990030051 27 ILVVNDDQACQSSVAKVLRHCSY-QVLHTGTVYDALHAIweKK-DrIDLVITNAHKLKSEGLAIIQNIEQKL-KLNVLHMS 104 89*********************.8888888888887774444.46**********************8865.89998888 PP STTT CS Response_reg 79 ahge 82 + Ote237990030051|237990030051 105 NDQR 108 6655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 8.68E-7 | 22 | 139 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 6.7E-9 | 26 | 112 | No hit | No description |
Pfam | PF00072 | 2.9E-5 | 27 | 114 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS51294 | 10.927 | 189 | 249 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.22E-15 | 190 | 250 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.7E-23 | 190 | 250 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.8E-19 | 193 | 246 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence Send to blast |
MYLHQYREGS SMYSEVDAGE DIISIGILVV NDDQACQSSV AKVLRHCSYQ VLHTGTVYDA 60 LHAIWEKKDR IDLVITNAHK LKSEGLAIIQ NIEQKLKLNV LHMSNDQRIE PKGELFSFSA 120 YELNGLSITG FYNLLENARL MEDDKMAAKN FDRASISDAA AETNKASSSI DDEVRLNQKR 180 KAAESYGRNK KRPRFNWTNE MHEKFLIAVE SLGGPKPAYP NMIVKHMGVP GLSREHVASH 240 LQKYRLVVKN MRNEVQGIGD LTSPTASRLA SFWMNLTAFP HIPALEESKL QYTSRSSFCS 300 TPGRKFYPRF RVSHLNDDRG GVDGLRNTTP FRNESSSCSK FVGFRFDGKK IYYGPIKKDA 360 LFSGPEGSES QSASYAEHTG SILQQSCLLG SPSGETAARE PDSISSNALE IYAATTSSMF 420 APRPHQDLLL QPLEAGGNGF TEQSGYAFDD DALQAPQSPQ MFQDLDEIFN QSGKEDDILI 480 NGIENACHQL DFLDLDDTFF SEGD |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3659 | 16 | 20 |