PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote237954130021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 308aa MW: 34378.5 Da PI: 8.2932

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote237954130021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2.1e-09	75	175	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC....................................................T CS HLH 3 rahnerErrRRdriNsafeeLrellPkas.................................................kap 34 ++h+e+ErrRR+riN +e Lr l+P++ + Ote237954130021\|237954130021 75 KSHSEAERRRRERINAHLESLRGLVPNSEkfhnrdfacsapfgdvkisnrrismafveegivlmecgmraiddvahrqLLS 155 58*************************544777777777777777777777777777777777777777777777774333 PP TS-STCHHHHHHHHHHHHHH CS HLH 35 skKlsKaeiLekAveYIksL 54 s ++Ka+ L ++v Ik+L Ote237954130021\|237954130021 156 SFLMDKATLLAEVVSQIKQL 175 33377777777777777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.903	72	175	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.2E-7	75	175	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.1E-11	76	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	9.87E-10	76	100	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-5	78	181	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	9.87E-10	153	185	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.1E-11	158	177	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
MYCNNQYNLS LESSGELLNQ SSLKSSRILE KSECLSMPIK QSLVLDGEKG ELVKASGRVG 60 KRNGVSETKT VEALKSHSEA ERRRRERINA HLESLRGLVP NSEKFHNRDF ACSAPFGDVK 120 ISNRRISMAF VEEGIVLMEC GMRAIDDVAH RQLLSSFLMD KATLLAEVVS QIKQLRTTAS 180 QASEGLHIPM DIDEVKVEAL ENRAGDGSFL IRASLCCEHW PDLLSDVRQM INNLPVRVLK 240 SEISTLRGRV KIAFLMTTVE RNSVSSVHLA LSNILEKVSA LTESAEQLFI PRKRQRVSCL 300 DSSSYLFA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096433.2	3e-70	transcription factor bHLH30-like
TrEMBL	A0A4D8ZNT7	1e-104	A0A4D8ZNT7_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6730	22	30