PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote237918370011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 444aa    MW: 49950.5 Da    PI: 6.4553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote237918370011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12253300355
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   r+h   Er+RR+++N++f  L +l+P+      +K++K+++L +++eY+++L+
  Ote237918370011|237918370011 253 RNHVLSERKRREKLNKRFMILGSLVPSG-----GKVDKVSVLDHTIEYLRELE 300
                                   579999********************98.....8****************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.9E-8539IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.005250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-18253318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-10253300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-12253304No hitNo description
Gene3DG3DSA:4.10.280.103.3E-17254318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-15256305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MHILNLQTVV CFPHLGGVVE LGTTELVAED PNLIQHINSF LESSVHPRTP EEGLDQLLDD  60
PYMKMCSPNN SSDDFADNLL REGSNVEEGI DGEASQMQSW QVMDDAVSKC LNSSMNSSDC  120
IYQTHGEPAM IIPVSDEKKE TKRCLHDNQD CNQQKSCDIQ GNDDVHYHTI LSNLLKSSHQ  180
LILGPYNRNG NRESSFICWR KDGILGARVP QRGTPQKLLK KVLFKVARMH ESCRAQSGKS  240
YGKSKRELDE IDRNHVLSER KRREKLNKRF MILGSLVPSG GKVDKVSVLD HTIEYLRELE  300
RKVEELESYK EAMERESTTH SKSQDATERT SDNYGNDESK KPASNKRRAS CDTGRVWLRD  360
SLTDNVSVSV SDNDLLIELS CLGKESVLLE IMETLNKMHL ETHAIQSSTT DGTLSITVIA  420
KCMGLKPPPA IVLRQALQKV IRKC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080947.11e-176transcription factor EGL1 isoform X1
TrEMBLA0A4D8YK460.0A0A4D8YK46_SALSN; Cycloeucalenol cycloisomerase
STRINGMigut.E01090.1.p1e-136(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45762435