PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote237894910041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 285aa MW: 31363.9 Da PI: 7.4447 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.5 | 8.7e-07 | 106 | 145 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + RR+ri +++ L++l+P+ + K + a++L + v+Y+k L Ote237894910041|237894910041 106 QLRRERIAERIRALQDLVPSvN------KTDRAAMLDEIVDYVKFL 145 56******************55......****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.046 | 96 | 145 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.1E-5 | 102 | 151 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.85E-11 | 106 | 158 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.9E-11 | 109 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 0.00117 | 119 | 150 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
DCGGGAVEFP LGLSLEQGKA GFLDASGSGR RFRREDVFHP RGASTVKPGF HGQPMTNTVP 60 TAPQPPAVRP RMRARRGQAT DPHSIAERVC PLIPKTPLES AKLSLQLRRE RIAERIRALQ 120 DLVPSVNKTD RAAMLDEIVD YVKFLRLQVK YFCDEFHCLY LASVLGNECE SPFSSILHLN 180 DIFFLFDLSL TCQVLSMSRL GGAGAVAPSI ICRESSEDGR TQAAWEKWSD DGTERQVAKL 240 MEENVGAAMQ FLQSKALCLM PISLASLIYH AHPPDTVKSE SNPPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831677.1 | 1e-110 | PREDICTED: transcription factor UNE12 | ||||
Swissprot | O22768 | 4e-82 | UNE12_ARATH; Transcription factor UNE12 | ||||
TrEMBL | A0A022S2E7 | 1e-109 | A0A022S2E7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D00370.1.p | 1e-109 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5799 | 24 | 34 |
Publications ? help Back to Top | |||
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