PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote237887350021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB_related | ||||||||
Protein Properties | Length: 120aa MW: 13802.7 Da PI: 10.1637 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.1e-09 | 50 | 92 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I ++++ + q++++++ + Ote237887350021|237887350021 50 AWTRQEEESFFSALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 92 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.05E-11 | 43 | 97 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 13.413 | 46 | 97 | IPR017884 | SANT domain |
SMART | SM00717 | 3.2E-6 | 47 | 95 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.6E-7 | 49 | 95 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 6.09E-7 | 50 | 93 | No hit | No description |
Pfam | PF00249 | 1.8E-7 | 50 | 92 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence Send to blast |
MVTQVSLDHE LRICPDYLGS KDGDTSVPPS SQGQAAPQMP AKKQTRQWAA WTRQEEESFF 60 SALRQVGKNF EKITSRVQSK NKDQVRHYYY RLVRRMNKLL GPELCLDAKN SKDTNAAMLR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077326.1 | 1e-63 | TSL-kinase interacting protein 1 isoform X1 | ||||
Refseq | XP_020549588.1 | 1e-63 | TSL-kinase interacting protein 1 isoform X2 | ||||
Swissprot | Q8LJT8 | 1e-46 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A2G9H0X9 | 6e-65 | A0A2G9H0X9_9LAMI; Polycomb-group transcriptional regulator | ||||
STRING | EOY07887 | 5e-51 | (Theobroma cacao) | ||||
STRING | cassava4.1_024564m | 6e-52 | (Manihot esculenta) | ||||
STRING | Solyc09g008100.2.1 | 5e-51 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8640 | 17 | 19 |