PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote237540160011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 27625.3 Da PI: 8.218 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.5 | 3.6e-11 | 60 | 102 | 3 | 50 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveY 50 ++h+e+ErrRR+riN +++Lr+l+P K++Ka L ++++ Ote237540160011|237540160011 60 KNHSEAERRRRERINAHLATLRTLIPGT-----NKMDKAGLLGEVINQ 102 58*************************6.....499999999888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.843 | 57 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.97E-13 | 60 | 112 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.7E-9 | 60 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.7E-13 | 61 | 109 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-11 | 63 | 112 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MGYFKSFDGI PEKYLGFQGV VRNIGSSSLV LDNERGELVK SLMKPGQKLA DAEKALIALK 60 NHSEAERRRR ERINAHLATL RTLIPGTNKM DKAGLLGEVI NQVKILRQSA AEATNGTLVP 120 SDIDEVTVEE EEDRSDATSI SIRASLCCDF KHELLSDLRE AVEALPDLKA VRAEISTLGT 180 RMVNVFVISG PKSQQGEGGQ PFVELIRQAF RSVLDKFYAS EELSSRNTSS KRRRVSFFAS 240 SSSTFSSGGV W |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011100403.1 | 1e-109 | transcription factor bHLH30-like | ||||
TrEMBL | A0A1S4BW81 | 2e-92 | A0A1S4BW81_TOBAC; transcription factor bHLH30-like | ||||
TrEMBL | A0A1U7X2H7 | 2e-92 | A0A1U7X2H7_NICSY; transcription factor bHLH30-like | ||||
STRING | XP_009786357.1 | 3e-93 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11989 | 21 | 23 |