PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100278270001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 69aa MW: 7803.97 Da PI: 9.1339 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 92.2 | 4.6e-29 | 15 | 67 | 3 | 56 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 v+Y+eC+kNhAas+G +avDGC+Efmp+ ge+g+ aa++CaAC+CHRnFH++ Ote100278270001|100278270001 15 LVTYEECRKNHAASIGKYAVDGCCEFMPA-GEKGSGAAFRCAACNCHRNFHKKV 67 589*************************9.999*******************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.9E-27 | 16 | 67 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 3.0E-15 | 16 | 66 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 8.5E-25 | 17 | 66 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.396 | 18 | 67 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence Send to blast |
MTQHKERKID SKERLVTYEE CRKNHAASIG KYAVDGCCEF MPAGEKGSGA AFRCAACNCH 60 RNFHKKVVR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Essential protein. Putative transcription factor. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010246148.1 | 5e-25 | PREDICTED: mini zinc finger protein 2-like | ||||
Refseq | XP_010653170.1 | 2e-24 | PREDICTED: mini zinc finger protein 2-like | ||||
Swissprot | Q9SB61 | 1e-19 | ZHD2_ARATH; Zinc-finger homeodomain protein 2 | ||||
TrEMBL | A0A2G9HH18 | 4e-35 | A0A2G9HH18_9LAMI; Uncharacterized protein | ||||
STRING | Migut.L01769.1.p | 1e-33 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1105 | 24 | 86 |
Publications ? help Back to Top | |||
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