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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ote100277900011 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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| Family | GeBP | ||||||||
| Protein Properties | Length: 251aa MW: 27725.6 Da PI: 9.5191 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 57.1 | 5.3e-18 | 1 | 57 | 41 | 97 |
DUF573 41 vkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
+k++ +++++k+qlveK+rrLKkK+++ +k +gke +f+++h+q +fe+s+kiWg
Ote100277900011|100277900011 1 IKSKFQLDFNKNQLVEKLRRLKKKYRNVISKFGNGKEYTFKSPHEQATFEISSKIWG 57
68999***************************************************8 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF04504 | 1.3E-17 | 1 | 57 | IPR007592 | Protein of unknown function DUF573 |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 251 aa Download sequence Send to blast |
IKSKFQLDFN KNQLVEKLRR LKKKYRNVIS KFGNGKEYTF KSPHEQATFE ISSKIWGNVA 60 VNGASAYRAP PAPIDEDDDN NPNFVDCQSP NLNGIDINSK TPRSRKRNRA GAMKMEEKQF 120 NTPNINISNA QPVTAVPPAV AAPVIGVGIT GSLSSVIEET VKSCLSPIFK ELLCNSMSPN 180 LNTNASCCGN GLALGRSPLP FCLGTAITGD KVSNERWRKQ QILELEVFSK RLELVQDQIS 240 EQLQELRSMG N |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020552957.1 | 1e-125 | probable transcription factor At3g04930 | ||||
| TrEMBL | A0A4D9B7X4 | 1e-142 | A0A4D9B7X4_SALSN; Uncharacterized protein | ||||
| STRING | Migut.N01941.1.p | 1e-103 | (Erythranthe guttata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA4052 | 24 | 45 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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