PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100277210011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 140aa    MW: 15733.7 Da    PI: 6.8918
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100277210011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.96e-151876563
                                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                  ++ +r+q+NRe+ArrsR RK++ ++ L   v++L +eN +  + ++  +++  +l++++
  Ote100277210011|100277210011 18 RKRKRMQSNRESARRSRMRKQKHLDDLMAQVAQLHKENAQILSSVDLTTQHFLNLEAQN 76
                                  7889**********************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-201478IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-111564No hitNo description
PROSITE profilePS5021710.9211679IPR004827Basic-leucine zipper domain
PfamPF001708.3E-121776IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-121871No hitNo description
CDDcd147023.61E-191969No hitNo description
PROSITE patternPS0003602136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MASSSGNSAS EEGLMEQRKR KRMQSNRESA RRSRMRKQKH LDDLMAQVAQ LHKENAQILS  60
SVDLTTQHFL NLEAQNSVLR AQMTELAHRL QSLNDILNFV NPAAAGSCMV ESEEGFGEGF  120
FNGSLGLSHH HPIMADMFDY
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083621.12e-57bZIP transcription factor 44
SwissprotC0Z2L51e-43BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2G9HZS25e-50A0A2G9HZS2_9LAMI; Uncharacterized protein
STRINGMigut.C00766.1.p4e-50(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]