PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100276730021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28045.9 Da PI: 6.2423 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.5 | 3.8e-51 | 25 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratks 80 + pGfrF+Ptdeel+++yLk+k++g++ + evi+evdi+++ePwdLp ++v ++++ew+fFs+r +ky++g++++rat s Ote100276730021|100276730021 25 MFPGFRFSPTDEELIQYYLKRKLQGSHEGV-EVIPEVDICRHEPWDLPgESVIQSDSEWFFFSPRGRKYPNGSQSKRATVS 104 579************************888.99***************767777899************************ PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gyWkatgk+++v+s +++l+g+k+tLvf++grapkg++t+W+mhey+ Ote100276730021|100276730021 105 GYWKATGKERSVKS-GSTLIGTKRTLVFHTGRAPKGKRTEWIMHEYTT 151 **************.99*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-56 | 18 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.237 | 25 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.1E-27 | 27 | 150 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0009910 | Biological Process | negative regulation of flower development | ||||
GO:0034976 | Biological Process | response to endoplasmic reticulum stress | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MGHDERARSG INIPMEISIA EASSMFPGFR FSPTDEELIQ YYLKRKLQGS HEGVEVIPEV 60 DICRHEPWDL PGESVIQSDS EWFFFSPRGR KYPNGSQSKR ATVSGYWKAT GKERSVKSGS 120 TLIGTKRTLV FHTGRAPKGK RTEWIMHEYT TTDKSEDAMV VCRLRKNREF QLNDDPTRDS 180 PGERGFLAVD NSTPALSGVE QSGLLNAGSC SKDCSSSHNS HSVEQIDSGS GSASESDEKV 240 TNESSHHASN LNE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-44 | 24 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-44 | 24 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-44 | 24 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-44 | 24 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swm_B | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swm_C | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swm_D | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swp_A | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swp_B | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swp_C | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
3swp_D | 1e-44 | 24 | 168 | 19 | 169 | NAC domain-containing protein 19 |
4dul_A | 1e-44 | 24 | 168 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 1e-44 | 24 | 168 | 16 | 166 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in plant cell division. {ECO:0000269|PubMed:16803883}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088938.1 | 1e-123 | NAC domain-containing protein 40 | ||||
Swissprot | Q94F58 | 6e-75 | NAC89_ARATH; NAC domain-containing protein 89 | ||||
TrEMBL | A0A2G9GC16 | 1e-127 | A0A2G9GC16_9LAMI; Uncharacterized protein | ||||
STRING | Migut.D02423.1.p | 1e-119 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4154 | 22 | 43 |
Publications ? help Back to Top | |||
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