PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100275200061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Nin-like
Protein Properties Length: 865aa    MW: 96929 Da    PI: 6.4808
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100275200061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK223.3e-075815963752
                        RWP-RK  37 RqyGIkRWPhRkiksl 52 
                                   Rq+GI RWP+Rkik++
  Ote100275200061|100275200061 581 RQHGITRWPSRKIKKV 596
                                   9*************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.450.406.0E-4164250IPR029016GAF domain-like
SuperFamilySSF542775.23E-20759846No hitNo description
PROSITE profilePS5174520.726765849IPR000270PB1 domain
SMARTSM006665.3E-23765849IPR000270PB1 domain
CDDcd064071.18E-36766848No hitNo description
PfamPF005641.8E-16766848IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.1E-21766846No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 865 aa     Download sequence    Send to blast
MEDDASTPIN NTMLETSLDF SLMDDLLYDG FWLETTNDPN FWQPSSTTSP DFPNPTSFPF  60
TSSKPNPDHH TLLKETEKTN ILGQPPSSAS PGISAGFLFE ETEVNKRLWA INHLKDSIKE  120
SDVLVQIWVP VKKGGKQVLT TNNQPFSLNP NYRNLAEYRY VSRNYHFAAD EGLPGRVFLK  180
KLPEWTPDVR FFKREEYSRV KHAQQYDVRG SLALPVFEGG SGKCLGVVEI VTTSMKVSYR  240
PELENICKAL ETVDLKSSDV LAEGTRNIEN WNEFYQSVLM EIRNVLRCVC DAHKLPLAQT  300
WAPCVEQRKG GCRHSDENYT HCVSTVDSAC YVADQDVTNF HEACSEYHLL KGEGIAGKAF  360
LTNQPCFSED ITLFSKTEYP LAHHARVFHL HAAVAIRLRS TYTGAADFVL EFFLPINCRE  420
AEDQRQMLDS LSTVVERTCQ SLRVVTDQEL AQEMSARERG SILLGRSDDG KHLRLEDFTL  480
KEPSPRASSW VTAMMDSQHK GKGVEFNHIP AFLENEEHYQ IDSGTKDGSG NFSFASGPLP  540
AGATTNTEKR RTKTEKTISL QVLRQYFAGX XXXXXSQEHW RQHGITRWPS RKIKKVGHSL  600
KKLQLVIDSV QGTDGSIQLS SFYNNFPELV STDASGKSHL PTSTMSGQLQ QGNTLLEGTL  660
LSPATTTSKS PTSSGSHSSS SSLCCSTGVK QSFPVNGSNS GDAFSAERNE VVLKRARSDV  720
ELRHLGQEDS KLLVRSYSQK ILSDHASNEA PPVPKNSSQE HDVGCFRVKA ALGDEKIRLT  780
LQPRWGFREL QQEVLRRFNI DNSSSRVDLK YMDDDSEWVL LTCDADLEEC KDIYRSMKSR  840
TIRVSLNQAF YHPSLGSSFG GSGPY
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551595.10.0LOW QUALITY PROTEIN: protein NLP2
SwissprotQ7X9B90.0NLP2_ARATH; Protein NLP2
TrEMBLA0A4D8ZGK10.0A0A4D8ZGK1_SALSN; Uncharacterized protein
STRINGMigut.B00011.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467