PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100275200061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Nin-like | ||||||||
Protein Properties | Length: 865aa MW: 96929 Da PI: 6.4808 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 22 | 3.3e-07 | 581 | 596 | 37 | 52 |
RWP-RK 37 RqyGIkRWPhRkiksl 52 Rq+GI RWP+Rkik++ Ote100275200061|100275200061 581 RQHGITRWPSRKIKKV 596 9*************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.450.40 | 6.0E-4 | 164 | 250 | IPR029016 | GAF domain-like |
SuperFamily | SSF54277 | 5.23E-20 | 759 | 846 | No hit | No description |
PROSITE profile | PS51745 | 20.726 | 765 | 849 | IPR000270 | PB1 domain |
SMART | SM00666 | 5.3E-23 | 765 | 849 | IPR000270 | PB1 domain |
CDD | cd06407 | 1.18E-36 | 766 | 848 | No hit | No description |
Pfam | PF00564 | 1.8E-16 | 766 | 848 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.1E-21 | 766 | 846 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 865 aa Download sequence Send to blast |
MEDDASTPIN NTMLETSLDF SLMDDLLYDG FWLETTNDPN FWQPSSTTSP DFPNPTSFPF 60 TSSKPNPDHH TLLKETEKTN ILGQPPSSAS PGISAGFLFE ETEVNKRLWA INHLKDSIKE 120 SDVLVQIWVP VKKGGKQVLT TNNQPFSLNP NYRNLAEYRY VSRNYHFAAD EGLPGRVFLK 180 KLPEWTPDVR FFKREEYSRV KHAQQYDVRG SLALPVFEGG SGKCLGVVEI VTTSMKVSYR 240 PELENICKAL ETVDLKSSDV LAEGTRNIEN WNEFYQSVLM EIRNVLRCVC DAHKLPLAQT 300 WAPCVEQRKG GCRHSDENYT HCVSTVDSAC YVADQDVTNF HEACSEYHLL KGEGIAGKAF 360 LTNQPCFSED ITLFSKTEYP LAHHARVFHL HAAVAIRLRS TYTGAADFVL EFFLPINCRE 420 AEDQRQMLDS LSTVVERTCQ SLRVVTDQEL AQEMSARERG SILLGRSDDG KHLRLEDFTL 480 KEPSPRASSW VTAMMDSQHK GKGVEFNHIP AFLENEEHYQ IDSGTKDGSG NFSFASGPLP 540 AGATTNTEKR RTKTEKTISL QVLRQYFAGX XXXXXSQEHW RQHGITRWPS RKIKKVGHSL 600 KKLQLVIDSV QGTDGSIQLS SFYNNFPELV STDASGKSHL PTSTMSGQLQ QGNTLLEGTL 660 LSPATTTSKS PTSSGSHSSS SSLCCSTGVK QSFPVNGSNS GDAFSAERNE VVLKRARSDV 720 ELRHLGQEDS KLLVRSYSQK ILSDHASNEA PPVPKNSSQE HDVGCFRVKA ALGDEKIRLT 780 LQPRWGFREL QQEVLRRFNI DNSSSRVDLK YMDDDSEWVL LTCDADLEEC KDIYRSMKSR 840 TIRVSLNQAF YHPSLGSSFG GSGPY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020551595.1 | 0.0 | LOW QUALITY PROTEIN: protein NLP2 | ||||
Swissprot | Q7X9B9 | 0.0 | NLP2_ARATH; Protein NLP2 | ||||
TrEMBL | A0A4D8ZGK1 | 0.0 | A0A4D8ZGK1_SALSN; Uncharacterized protein | ||||
STRING | Migut.B00011.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1598 | 24 | 67 |