PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100275050021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 23035.1 Da PI: 9.5814 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.8 | 6.3e-51 | 29 | 181 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................kvkaeekewyfFsk 63 GfrF+Ptdeelv++yL+ k++g++ + evi+e+d++k+ePwdLp +k+++ ew+fF++ Ote100275050021|100275050021 29 XGFRFRPTDEELVNHYLRLKINGRHSAV-EVIPEIDVCKWEPWDLPGmlfllysticslrfqiqslsVIKSDDPEWFFFCP 108 7************************888.99***************5599*********999988876777888******* PP NAM 64 rdkkyatgkrknratksgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 rdkky++g r+nrat++gyWkatgkd++++s+ + +++glkktLvfy+grapkge+t+W+mheyr+ Ote100275050021|100275050021 109 RDKKYPNGYRSNRATEAGYWKATGKDRTIKSRksstsghsQAHAIGLKKTLVFYRGRAPKGERTNWIMHEYRA 181 *******************************9666655544445***************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-51 | 26 | 188 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 48.782 | 27 | 200 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-28 | 29 | 180 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0071470 | Biological Process | cellular response to osmotic stress | ||||
GO:1900426 | Biological Process | positive regulation of defense response to bacterium | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005516 | Molecular Function | calmodulin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
LDSWVHAATX XXXXXXXXXX XXXXXXXXXG FRFRPTDEEL VNHYLRLKIN GRHSAVEVIP 60 EIDVCKWEPW DLPGMLFLLY STICSLRFQI QSLSVIKSDD PEWFFFCPRD KKYPNGYRSN 120 RATEAGYWKA TGKDRTIKSR KSSTSGHSQA HAIGLKKTLV FYRGRAPKGE RTNWIMHEYR 180 ATEPDLDGTG SGQASQIGFL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-40 | 30 | 184 | 20 | 145 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-40 | 30 | 184 | 20 | 145 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-40 | 30 | 184 | 20 | 145 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-40 | 30 | 184 | 20 | 145 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swm_B | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swm_C | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swm_D | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swp_A | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swp_B | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swp_C | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
3swp_D | 3e-40 | 30 | 184 | 23 | 148 | NAC domain-containing protein 19 |
4dul_A | 3e-40 | 30 | 184 | 20 | 145 | NAC domain-containing protein 19 |
4dul_B | 3e-40 | 30 | 184 | 20 | 145 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00108 | PBM | Transfer from AT4G35580 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070419.1 | 1e-87 | protein NTM1-like 9 | ||||
Refseq | XP_011070420.1 | 1e-87 | protein NTM1-like 9 | ||||
Swissprot | F4JN35 | 1e-78 | NTL9_ARATH; Protein NTM1-like 9 | ||||
TrEMBL | A0A2Z4K547 | 2e-85 | A0A2Z4K547_TECGR; NAC2 protein (Fragment) | ||||
TrEMBL | A0A2Z7CE79 | 7e-84 | A0A2Z7CE79_9LAMI; Uncharacterized protein | ||||
STRING | Migut.A01059.1.p | 7e-87 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14316 | 7 | 10 |
Publications ? help Back to Top | |||
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