PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100273250021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Dof

Protein Properties

Length: 270aa MW: 30106.3 Da PI: 7.841

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100273250021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	77.2	2e-24	15	74	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ ++cprC+s t+f y+nn s +qPry C++C+r Wt GG lr vP+Gg +r k++ Ote100273250021\|100273250021 15 PKNPMRCPRCNSPSTRFRYFNNNSPTQPRYHCRSCKRQWTVGGRLRLVPIGGNTRSGKRK 74 67889**************************************************98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-13	15	66	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.7E-24	17	73	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	22.219	19	73	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MQRAVEETQQ QQNKPKNPMR CPRCNSPSTR FRYFNNNSPT QPRYHCRSCK RQWTVGGRLR 60 LVPIGGNTRS GKRKASSSGG GSAKSQAPQP PLPSEEQHRQ NLPLMNPMAS QNFDTALFQP 120 MTDMLAGVSP SNYFSDQISC SQTLIQQGSN QYDNGRNLFS SADTTMTIPQ EWNVQTIAPQ 180 HDLPQKNPIA FESYQTRNEV INGHSPHLCI DSVVQPVWPV KSLAQDITHD SSFTTSNASS 240 QKNLSGDTID IEDTNVNVDE WLNFPGSDPP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16144	5	6