PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100272610021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bZIP | ||||||||
Protein Properties | Length: 198aa MW: 22077.5 Da PI: 7.7775 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23 | 1.7e-07 | 4 | 32 | 13 | 41 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeae 41 NR +A rs +RK +i eLe+kv++L++e Ote100272610021|100272610021 4 NRQSAARSKERKARYISELERKVQTLQTE 32 **************************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14703 | 3.19E-14 | 1 | 33 | No hit | No description |
SuperFamily | SSF57959 | 5.98E-7 | 2 | 33 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-7 | 4 | 33 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
ILANRQSAAR SKERKARYIS ELERKVQTLQ TEAXXXXLCT TNTLPGLAPP TALRDTTGLS 60 NENTELKLRL QAMEQQAQLR DALNEALRQE VERLRVATGE ISNTSETFNL TMQRIPYNQA 120 TFFSNHPQAG SNESQNIQMQ HFQAGISSHP HPMLSAPDSM HQHQDPLGRF QGLDISNRST 180 RVKSEGPSIS ASESSSTF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication. {ECO:0000269|PubMed:14704272}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076587.1 | 3e-83 | transcription factor RF2b | ||||
Swissprot | Q6S4P4 | 3e-55 | RF2B_ORYSJ; Transcription factor RF2b | ||||
TrEMBL | A0A4D8Y118 | 3e-86 | A0A4D8Y118_SALSN; Uncharacterized protein | ||||
TrEMBL | A0A4D8ZAP7 | 3e-86 | A0A4D8ZAP7_SALSN; Uncharacterized protein | ||||
STRING | Migut.F00604.1.p | 3e-68 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3425 | 23 | 49 |
Publications ? help Back to Top | |||
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