PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100271160031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 281aa    MW: 31295.9 Da    PI: 4.4503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100271160031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2292.7e-0991112229
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrk 29 
                                   +y+GVr++k +g+W+AeIrdp     rk
  Ote100271160031|100271160031  91 KYRGVRQRK-WGKWAAEIRDP-----RK 112
                                   8*******9.**********9.....44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.18E-691123IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-1091114IPR001471AP2/ERF domain
PROSITE profilePS5103211.54891126IPR001471AP2/ERF domain
PfamPF008471.6E-491112IPR001471AP2/ERF domain
SMARTSM003809.0E-491137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MSKSNRQNSN RKPRIKPFPS KPMKKVRILC SDPYATDSSD DERTAVKKVK RIVREVSFSI  60
GPESDTSSVQ ESSIEEKMKR IDTNPSPNSG KYRGVRQRKW GKWAAEIRDP RKRLEFEALG  120
SNPKPEKNGF DDITRNSKTV YSMVVSELVE SLQHHKDTVV SVSQDSSGSV VSLNSTSDFS  180
VVETPMSEKA SLVADELAAL AQIKEDFALD SLFLVDDDLT APIDDDIFGL NDLPICGLDG  240
DQPTELPDFD FEFDFDDVCD ETGSWMDDMV MNGAPLNIAC P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.11e-77ethylene-responsive transcription factor ERF118-like
TrEMBLA0A4D9BPQ78e-71A0A4D9BPQ7_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351