PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100268410021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 508aa    MW: 56417 Da    PI: 8.4559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100268410021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.00029260277219
                                   HHHHHHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsa 19 
                                   r +h++ E+rRR++iN++
  Ote100268410021|100268410021 260 RSKHSATEQRRRSKINDR 277
                                   889*************96 PP

2HLH25.32.7e-083203521955
                                   HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    f++Lre++P++    ++K +Ka+ L +++eYI+ Lq
  Ote100268410021|100268410021 320 LFHKLREIIPNS----DQKRDKASFLLEVIEYIQFLQ 352
                                   699********9....9*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.6E-18260277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.49E-8260355No hitNo description
SuperFamilySSF474598.24E-10320379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-5320352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-18321374IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MLDLGICGPS LGLADISKFK KPQSLISFCQ NVGGYLKTHD FLQPLEREGK NVTTTKEDIK  60
AGLAAVDRPS VPAPPASVEH ILPGGIGTYS ISYFNQMALK PEGSLFTAQP SSTARNDENS  120
NCTSYPGGSF TLWDESAIKK GKTGKENISV ERHILREAGV NVVGGQWTSF LEKPSRSSSN  180
HRHNATNFSS LSSSQPSSSQ KNQSFMDMMM TSTKNDLXXX XXXXXXXFMS IKKEPSCHLK  240
GNLSVKVEAK TIDQKPNTPR SKHSATEQRR RSKINDRHVY QPPQFEVQDF DQLSEFASVF  300
PCYIMSSYHH PESFLGLFTL FHKLREIIPN SDQKRDKASF LLEVIEYIQF LQEKVNRYEN  360
SYNVWNQESS KMMHWQRNCH INEGVIDRTV GVSSDSAPTA LVFGKKFEEN KGGVSPSLPT  420
SGQNLVDSDL SSDTTLRERV QPPILTTKGL ANILSLGSIS VPPKLGSEVD KSTTRPQSQL  480
LRSCNKMTEQ EVSIESGTIN ISSVYSQG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078682.10.0transcription factor BIM1 isoform X1
TrEMBLA0A4D8ZFI00.0A0A4D8ZFI0_SALSN; Uncharacterized protein
STRINGMigut.D01611.1.p1e-160(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39692345