PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100268130001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22473.9 Da PI: 5.2952 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 6.9e-18 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++ +g Ote100268130001|100268130001 25 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCVKG 75 59*****998.**********9...336*********************999776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.04E-19 | 25 | 85 | No hit | No description |
Pfam | PF00847 | 2.8E-11 | 26 | 75 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.535 | 26 | 83 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.4E-33 | 26 | 89 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.8E-30 | 26 | 84 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-20 | 26 | 85 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.3E-8 | 27 | 38 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 49 | 65 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MVKQESKTVX XXXXXXXXXX XXXKKKYKGV RMRSWGSWVS EIRAPNQKTR IWLGSYSTPE 60 AAARAYDAAL LCVKGPKANL NFPKSLPKFN LSDHSAAAVC PKSIQRIAAA AAANCDLPET 120 SVDLSPQSPF SPSLSSSSNE ASFGIEDDLI SLGAAAADYS WYNFESPKYY EMMNGVFFDP 180 SMVVVDDDFC SFEDGDIRLW SFC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853346.1 | 3e-52 | PREDICTED: ethylene-responsive transcription factor ERF014 | ||||
Swissprot | Q9SFE4 | 5e-42 | ERF12_ARATH; Ethylene-responsive transcription factor ERF012 | ||||
TrEMBL | A0A2G9GNX2 | 2e-55 | A0A2G9GNX2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N03295.1.p | 1e-51 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Publications ? help Back to Top | |||
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