PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100267040011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 319aa MW: 35923.5 Da PI: 8.262 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42 | 1.7e-13 | 71 | 122 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR ++N+ ++ Lr+l+P + + ++ + a+i+ A+e++k+L+ Ote100267040011|100267040011 71 QRMTHIAVERNRRXQMNEHLAVLRSLMPDS---YVQRGDQASIVGGAIEFVKELE 122 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 2.5E-13 | 69 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.36E-16 | 69 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.41E-12 | 69 | 126 | No hit | No description |
PROSITE profile | PS50888 | 15.053 | 70 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.3E-11 | 71 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-9 | 76 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MALEAISSTD LLNFIIYDSN NASAAAATFA CHNHSSPQEI PPPPPESAVP GRKKRRRRPK 60 LCKNKEEAES QRMTHIAVER NRRXQMNEHL AVLRSLMPDS YVQRGDQASI VGGAIEFVKE 120 LEHILQSLEA KKFALLEHAN VTNKEHQNYH HHQTNEDDQK QDLGESSPFA QFFAFPQFSC 180 THSQLGHKYT SQSKAAVADI EVTLIETHAN IRILSRRRVR QLLKIASAFQ SVFLTILHLN 240 VTTLDSFVLY SISAKVEEGC QLNSADDIAG AVHHMLRIIE EEALLERTPG RGCPIWGRAR 300 AVALRGRYWA MNPSSLIWS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070274.1 | 1e-135 | transcription factor bHLH71 | ||||
Swissprot | Q9C7T4 | 4e-75 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A0H3YB55 | 1e-143 | A0A0H3YB55_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.O00536.1.p | 1e-122 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5632 | 24 | 36 |
Publications ? help Back to Top | |||
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