PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100266660081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 404aa MW: 44758.9 Da PI: 6.3503 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.0002 | 300 | 332 | 17 | 54 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L +A+eYIk L Ote100266660081|100266660081 300 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKLL 332 55666677777776.....8****************88 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.166 | 283 | 332 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-6 | 293 | 340 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.24E-4 | 293 | 336 | No hit | No description |
SuperFamily | SSF47459 | 2.75E-10 | 293 | 347 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042631 | Biological Process | cellular response to water deprivation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071472 | Biological Process | cellular response to salt stress | ||||
GO:2000214 | Biological Process | regulation of proline metabolic process | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence Send to blast |
MEEEFQGGVC GGNWWNSSRN LFSSSPCSAA VNDPSGWLNP NFIIDTKTKK SLSDDSTASS 60 DGGGSVVLQE PPKSHITTNR NVPIDSSTLE MMTDDWNNQD LIHDSARSQE NYSHMLQPMN 120 SSMNYEGFLL EHHPSNSFTQ CQDXXXXXXX XSFPLNTASY GYTSSLLQTL FDTNPQPHQT 180 LLDSPNLGMN STPSTMMRPT FPKPSNNFQF VNNTAPFWNA SPAGEVRPSF LPSSTPQLIP 240 SALAKARLNQ QDLRSKLHNE KALEAESAAK KGGSEPSFKR PRIDTPSPLP TFKVRKEKLG 300 DRVTALQQLV SPFGKTDTAS VLHEAIEYIK LLHDQVTVLS TPYLKNGQPP LQHQQGLDKI 360 KNQEEPMKDL RSRGLCLVPI SSTFPVATET TADFWTPTFG SSFR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086152.1 | 1e-128 | transcription factor bHLH112 | ||||
TrEMBL | A0A4D9ARZ8 | 1e-153 | A0A4D9ARZ8_SALSN; Uncharacterized protein | ||||
STRING | VIT_00s0274g00070.t01 | 1e-116 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA860 | 24 | 86 |