PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100263780071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bZIP | ||||||||
Protein Properties | Length: 308aa MW: 33595.8 Da PI: 6.1598 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.7 | 1.4e-09 | 107 | 153 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 k+ +r NReA r++R++Kka+ + Le++v L a N++L k+l+ Ote100263780071|100263780071 107 KAKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLMKRLQG 153 66677799***********************************9974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-13 | 99 | 169 | No hit | No description |
SMART | SM00338 | 1.9E-10 | 102 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 5.7E-14 | 105 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.209 | 105 | 152 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-6 | 107 | 152 | No hit | No description |
CDD | cd14686 | 1.09E-12 | 108 | 162 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MDDGELDFPS DQMLSCLDMT NAQSSCSFDM DELFSRTQSC NDALGRTEAY TDVLGRTQAC 60 THAHACNPSG PDKSHTHTCI HVHTQIMPSP SEGQEPSDDT AESVDKKAKK RPLGNREAVR 120 KYREKKKARA ASLEDEVVRL RALNQQLMKR LQGQALLEAE IARLKCLLVD XXXXXXXXXX 180 XGEIGSFPYQ KPNKSGDVYQ NVTNPNLPGT YVMNPCNMQR SDPLYCLHSG NEAALSGQGL 240 VDCGFENLQC SGNQNSTPEE LLDCGLGSGN LVSSANASNG SKRKGKPFDT FVACFLISVS 300 TRTSGGNK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the response to zinc ion deficiency. Binds to the consensus sequence 5'-[AG]TGTCGACA[CT]-3' also called zinc deficiency response element (ZDRE). The ZDRE sequence is conserved in the plant kingdom and present in the promoters of genes that constitute the primary response to zinc deficiency, comprising additional ZIP metal transporter genes (PubMed:20479230, PubMed:26306426). Required for zinc accumulation in roots. Mediates the expression of the zinc transporter ZIP12 during growth in zinc-deficient conditions. ZIP12 transporter is involved in zinc uptake in roots (PubMed:26306426). {ECO:0000269|PubMed:20479230, ECO:0000269|PubMed:26306426}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by zinc deficiency. {ECO:0000269|PubMed:20479230}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088608.1 | 1e-175 | basic leucine zipper 23 isoform X2 | ||||
Swissprot | Q8GTS2 | 4e-78 | BZP23_ARATH; Basic leucine zipper 23 | ||||
TrEMBL | A0A2G9HNQ3 | 1e-171 | A0A2G9HNQ3_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B00082.1.p | 1e-163 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2989 | 24 | 52 |
Publications ? help Back to Top | |||
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