PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100263660011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 404aa MW: 44429.9 Da PI: 7.0522

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100263660011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.1	1e-10	355	400	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k s a++L +Av++Ik+Lq Ote100263660011\|100263660011 355 SIAERMRRTRISEKMKKLQDLFPNM----DKQTSTADMLDLAVQFIKDLQ 400 689*******************7....688***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.96	349	399	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	6.8E-13	352	404	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.26E-10	353	403	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.2E-11	354	403	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.2E-8	355	400	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.9E-7	355	404	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence Send to blast
MFGSETVSRD MSRNSSFLLS NQSNHSSFKQ IPAEGQFTKS RDSMGSDLFL NQTHLQQQHQ 60 NGQNGVGLAR YRSAPSSFLA ALLDSTGENS SSGDESEALY SALMDGPRDL NQKSGGDQMH 120 YQMKQETGVE PEGRPGSGLM GYESAVSGGG GAIVGSYSLG MESHVDLRMN NGNGSNLVRQ 180 SSSPAGFFNG YGVMGEVGNY RVHNNHSKAT SSAANGMTMN NHMNFSSGQS STSRFMPSIP 240 ENVNESITAR NPENGHLGRT NSANLFSQDS WNDTSFNTLK RSRENDDDAR MFSNFNGLEN 300 QNGETRKNHH GLVHHLSLPK TSSEMAEVEK FLQFQPDTVP CQIRAKRGCA THPRSIAERM 360 RRTRISEKMK KLQDLFPNMD KQTSTADMLD LAVQFIKDLQ KQVD

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence Send to blast

MFGSETVSRD MSRNSSFLLS NQSNHSSFKQ IPAEGQFTKS RDSMGSDLFL NQTHLQQQHQ  60
NGQNGVGLAR YRSAPSSFLA ALLDSTGENS SSGDESEALY SALMDGPRDL NQKSGGDQMH  120
YQMKQETGVE PEGRPGSGLM GYESAVSGGG GAIVGSYSLG MESHVDLRMN NGNGSNLVRQ  180
SSSPAGFFNG YGVMGEVGNY RVHNNHSKAT SSAANGMTMN NHMNFSSGQS STSRFMPSIP  240
ENVNESITAR NPENGHLGRT NSANLFSQDS WNDTSFNTLK RSRENDDDAR MFSNFNGLEN  300
QNGETRKNHH GLVHHLSLPK TSSEMAEVEK FLQFQPDTVP CQIRAKRGCA THPRSIAERM  360
RRTRISEKMK KLQDLFPNMD KQTSTADMLD LAVQFIKDLQ KQVD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087339.1	0.0	transcription factor bHLH130
TrEMBL	A0A2G9FZD6	0.0	A0A2G9FZD6_9LAMI; Uncharacterized protein
STRING	Migut.B01333.1.p	1e-134	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4435	22	38