PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100262300021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | G2-like | ||||||||
Protein Properties | Length: 178aa MW: 19897.6 Da PI: 6.7184 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 43.5 | 6.9e-14 | 17 | 53 | 1 | 40 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg 40 kprl+Wt+eLH+rFveav+qLG +AtPk+++++ k Ote100262300021|100262300021 17 KPRLKWTSELHQRFVEAVDQLG---EATPKSLMRVQKHLQ 53 79*******************4...79*****99876655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.3E-12 | 15 | 55 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.8E-10 | 17 | 48 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 6.9E-10 | 48 | 72 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MAVPSKEMRL VLSSDAKPRL KWTSELHQRF VEAVDQLGEA TPKSLMRVQK HLQLRVEAQG 60 KYLQSVLRKA QDTISEYGCC SMEAENARAQ LAELVSMVNT HKQGHHESLE SSLTSSSEGS 120 SCKHQDRNFI SLSLMEMHPP TQAEPEPNQS KRLMLLDLNH LDSGPKLIDL NTTGDGSF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022949008.1 | 7e-32 | myb-related protein 1-like | ||||
Refseq | XP_023525209.1 | 8e-32 | myb-related protein 1-like | ||||
TrEMBL | A0A175YIC3 | 4e-30 | A0A175YIC3_DAUCS; Uncharacterized protein | ||||
STRING | Migut.L01279.1.p | 7e-22 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6036 | 19 | 32 |