PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100262160061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | BBR-BPC | ||||||||
Protein Properties | Length: 195aa MW: 21776 Da PI: 4.6813 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 142.6 | 7.8e-44 | 1 | 195 | 29 | 237 |
GAGA_bind 29 mssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla..salp..vgvqvlsgt 105 m++ aerda+irern+al e+k a+aerdma lqrd+a+aern+a+ erd+++ +l +++ s++ s+ p + + sg Ote100262160061|100262160061 1 MAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERNAAIQERDEAISSLRYRDSSMNdnSSIPdsLENDFASGG 81 78899*****************************************************99998866444411445677888 PP GAGA_bind 106 ksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.e 185 k ++ qq + l+d+ +++r+++ + ak +k++++++r+++ k++ + +++++ + Ote100262160061|100262160061 82 KRVHFQQQ--MRSLQDDDIDARDKDGK----------AAKSAKNPRAGKRSAESVIKEEVHSDT------YGLESDEDYlD 144 88886665..45566666664443311..........122222222222222222222222222......12222222213 PP GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtt 237 ++ ++k+ +l+ln++++Des++PvPvCsCtG+++ CY+WG+GGWqSaCCtt Ote100262160061|100262160061 145 KQVVSWKD-NLGLNQINFDESAMPVPVCSCTGSPQPCYRWGSGGWQSACCTT 195 34456665.8*****************************************8 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF06217 | 7.9E-41 | 1 | 195 | IPR010409 | GAGA-binding transcriptional activator |
SMART | SM01226 | 2.8E-16 | 1 | 195 | IPR010409 | GAGA-binding transcriptional activator |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence Send to blast |
MAITAERDAA IRERNMALEE RKRAFAERDM AMLQRDAAIA ERNAAIQERD EAISSLRYRD 60 SSMNDNSSIP DSLENDFASG GKRVHFQQQM RSLQDDDIDA RDKDGKAAKS AKNPRAGKRS 120 AESVIKEEVH SDTYGLESDE DYLDKQVVSW KDNLGLNQIN FDESAMPVPV CSCTGSPQPC 180 YRWGSGGWQS ACCTT |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099810.1 | 1e-97 | protein BASIC PENTACYSTEINE6 | ||||
Refseq | XP_011099811.1 | 1e-97 | protein BASIC PENTACYSTEINE6 | ||||
TrEMBL | A0A2G9GYT6 | 3e-98 | A0A2G9GYT6_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H01143.1.p | 3e-82 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8062 | 22 | 30 |