PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100261430111
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 431aa    MW: 47355.7 Da    PI: 9.319
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100261430111genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10178210436
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 
                                    k  rr+++NReAAr+sR+RKka++++Le+   
  Ote100261430111|100261430111 178 QKTLRRLAQNREAARKSRLRKKAYVQQLENSRL 210
                                   6889*************************8433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.1E-8170224No hitNo description
SMARTSM003381.7E-6175238IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.875177214IPR004827Basic-leucine zipper domain
PfamPF001701.9E-7179213IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-6179217No hitNo description
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
PfamPF141441.6E-28270339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MARATVNIGG DTNRRATASV MSSFISQTPV SNTIGKDVNA AQTSVRTDFG VIEQYIGFRV  60
GDGGNASHAA AFDPSLINQT ASLDLQSGAF DKSSASPNTF FQSGAVRMQK GLQPNLASVS  120
GAQGENWREA NMVDSSSHTE TSTDMDPDDK THKFEIGQSL AVVASDSSDR SKEKTPDQKT  180
LRRLAQNREA ARKSRLRKKA YVQQLENSRL KLTQLEQEQQ QARQQGLFAS SIGDQSNAGT  240
GNGALAFDMG YGRWVEEQNR XXXXXXXXXA VNAHVGDAEL ATIVENMTAH FNEIFRLKGN  300
ASKADVFHIL SGMWKTPAER CFLWIGGFRP SELLKLLASQ LEPLTEQQMN AISEGTSGNV  360
ANYMGQMAMA MGKLGTLEGF LQQADNLRQQ TLQQMHRTLT TRQSARALLL IHDYFSRLRA  420
LSSLWLSRPK E
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079069.10.0transcription factor TGA2.2
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLX2JIW30.0X2JIW3_SALMI; Transcription factor TGA2
STRINGMigut.J01654.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385