PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100256480111
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 168aa    MW: 19881.6 Da    PI: 6.968
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100256480111genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.59.3e-1682140563
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                   +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +++ +e+
  Ote100256480111|100256480111  82 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHASERHDQVLQEN 140
                                   689********************************************999999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1378142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.50780143IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-1382131No hitNo description
PfamPF001706.9E-1482140IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-1382155No hitNo description
CDDcd147021.16E-1883134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MQPNEITELH FLIPSNSTQY PPHFSLPSNY PSAYQLSRFP NPLYQLHTVP QVQEFNPHST  60
CFSSNSTSDE ADEQQLSIIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVVWLRNENH  120
QLIDKLNHAS ERHDQVLQEN AQLKEEASEL RQMLXXXXXX XXXXQSLS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.12e-92basic leucine zipper 43
SwissprotQ9FMC22e-41BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D9B9G01e-95A0A4D9B9G0_SALSN; Uncharacterized protein
STRINGMigut.H00570.1.p2e-82(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]