PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100256320061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WOX
Protein Properties Length: 267aa    MW: 30455.7 Da    PI: 9.8082
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100256320061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox71.87.8e-2368127357
                                   --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                   +R+++t+eql++Lee++++  r+psae+++++A+kl    +++ ++V++WFqN++a+e++
  Ote100256320061|100256320061  68 TRWNPTPEQLQALEEMYRRgIRTPSAEQIQQIAAKLgklgKIEGKNVFYWFQNHKARERQ 127
                                   8*****************99**************************************97 PP
2Wus_type_Homeobox111.25.6e-3667129365
             Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                   +tRW+PtpeQ++ Lee+y++G+rtP++e+iq+i+a+L + Gkie+kNVfyWFQN+kaRerq++
  Ote100256320061|100256320061  67 STRWNPTPEQLQALEEMYRRGIRTPSAEQIQQIAAKLGKLGKIEGKNVFYWFQNHKARERQRK 129
                                   79***********************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.4E-765132IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.7E-1068127IPR009057Homeodomain-like
CDDcd000863.28E-868129No hitNo description
SuperFamilySSF466895.56E-1568133IPR009057Homeodomain-like
PfamPF000462.0E-2068127IPR001356Homeobox domain
PROSITE profilePS5007111.61273128IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MWMLMDSNHP DRGRDQLNLA VGRKLRPLMP RPISNHSYST LSTHPCCCRN PKNLPWNHCI  60
KAAPLVSTRW NPTPEQLQAL EEMYRRGIRT PSAEQIQQIA AKLGKLGKIE GKNVFYWFQN  120
HKARERQRKR RQLELLAGKK MHHAHTKQTG PNMRYVDIEH RKKAPIPSNC STSSADSASM  180
HGAVIAGKEG WPEMPTAENE NCWQLDSSSS IKAITTGQEN SNIYTHENEE NQTLQLFPTG  240
ACPQEISDSL RTKITPIQFI EFLPIKN
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070619.12e-73WUSCHEL-related homeobox 1-like
SwissprotQ6X7K05e-34WOX1_ARATH; WUSCHEL-related homeobox 1
TrEMBLA0A2G9I8903e-78A0A2G9I890_9LAMI; Uncharacterized protein
STRINGMigut.L00355.1.p9e-66(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Publications ? help Back to Top
  1. Guan C, et al.
    Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
    Curr. Biol., 2017. 27(19): p. 2940-2950.e4
    [PMID:28943086]