PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100255780071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 346aa    MW: 38638.2 Da    PI: 4.4634
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100255780071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-194695255
                           AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Ote100255780071|100255780071 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                                  789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.26E-3145102No hitNo description
PfamPF008478.0E-144695IPR001471AP2/ERF domain
SMARTSM003803.8E-3646109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2746102IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-1946103IPR016177DNA-binding domain
PROSITE profilePS5103219.55946103IPR001471AP2/ERF domain
PRINTSPR003674.5E-84758IPR001471AP2/ERF domain
PRINTSPR003674.5E-86985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MARKRKAGEI SYDHGQDNLE ENPPSNFDEM VKEAAALGGV RRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPINSNST TTSALPPKIT  120
NLLISRIRAR NAALTAADSI VTTQHPSSSR LSVAGQTVEY SDEIPDYLES NLADFLNDSD  180
EYFAVENSQI ASDDSHCETD SVRVSSEAEI EEEINAMNLE AADLRFVDEI GGSIEYSPFE  240
IAEEISRPXX XXXXXXXXXX XXXXXXYERK FSASLYAFNG ITECLKLKLG NSARLDPSEQ  300
LSRLRNACKR NDNGDEEKVK ESGDSSFDGE SNLWSSIDLP TICYVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1339102771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098777.11e-129ethylene-responsive transcription factor 10-like
TrEMBLA0A4D9BU191e-120A0A4D9BU19_SALSN; EREBP-like factor
STRINGXP_009769291.12e-90(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037