PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100255470071
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 368aa    MW: 40468 Da    PI: 7.327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100255470071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.81.1e-13200255358
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                                   + kr rr+ +NRe+ArrsR+RK+a + e e+ v +L+ eN++L k+l  +++++ +
  Ote100255470071|100255470071 200 DTKRMRRMLSNRESARRSRRRKQAHLTERETQVSQLKIENSSLLKRLTDINQKYNE 255
                                   679*******************************************9999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-11196253No hitNo description
SMARTSM003381.1E-15198262IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.139200255IPR004827Basic-leucine zipper domain
PfamPF001704.0E-11201254IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.76E-9202253No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF124982.0E-16269348IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MICLTDSGRH TRLPFASTTM LTWSXXXXXX XATAGMNRSS SEWAFQRFLQ ESTFPTDDID  60
KIKANHHHSN DNQXXXXXXX XIPIDPEEYQ SFLKSRLELA CAAVALTRAS NGKGVQSVEA  120
AADIGSQVSN SSSSTANGRE SSKTQVKDFG GAVGVPPLPA ISRKSVTQVR STTSGSSGDQ  180
SDDDEAEGET EDTQNMDPAD TKRMRRMLSN RESARRSRRR KQAHLTERET QVSQLKIENS  240
SLLKRLTDIN QKYNESAVDN RVLKADVETL RAKVKMAEES VKRVTGLNSL FHAMPTFVRS  300
PETSAEAGVP IQDDPMQRYY HSMSNNHLTN HRIQTDLVEI PQTENVRPNA ASAIGGTSSS  360
ASRGAGEG
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091948.11e-144light-inducible protein CPRF2
SwissprotQ990902e-85CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A4D8Z4Z31e-119A0A4D8Z4Z3_SALSN; Uncharacterized protein
STRINGMigut.N01912.1.p1e-127(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]