PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100254650041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NF-YC | ||||||||
Protein Properties | Length: 198aa MW: 22358.6 Da PI: 9.4632 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 45.2 | 2.1e-14 | 18 | 99 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 + ++P r+kki+k d+d++++ +ea l++ + elf+ l+ +s a e+kr+t+ i a +r + dfl+d p+ Ote100254650041|100254650041 18 KLDIPTGRVKKIMKLDKDISKVNSEALFLVASSTELFLQFLAEKSAHVALEQKRKTISIEHIRLAAKRHRpTADFLLDSLPK 99 55799*********************************************************98888764389*****9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47113 | 8.09E-19 | 17 | 105 | IPR009072 | Histone-fold |
Pfam | PF00808 | 4.4E-18 | 21 | 82 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
Gene3D | G3DSA:1.10.20.10 | 9.2E-20 | 22 | 99 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MTEQEGGENP TAIDEPHKLD IPTGRVKKIM KLDKDISKVN SEALFLVASS TELFLQFLAE 60 KSAHVALEQK RKTISIEHIR LAAKRHRPTA DFLLDSLPKP PQPVERNPPG DRSKSRSDKK 120 PVPFATRSID AXXXXXXLSK VYLDLLVLSF DILSLYRPCL CYLDTQIQLV SIATFPTLKL 180 MRLFLFGDKF TETVNAVL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086780.2 | 7e-64 | nuclear transcription factor Y subunit gamma isoform X1 | ||||
Refseq | XP_011086781.2 | 7e-64 | nuclear transcription factor Y subunit gamma isoform X2 | ||||
TrEMBL | A0A2G9GVN9 | 2e-66 | A0A2G9GVN9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00728.1.p | 5e-63 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11435 | 24 | 25 |