PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100254070011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bZIP

Protein Properties

Length: 387aa MW: 42836.2 Da PI: 6.5763

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100254070011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20	1.5e-06	247	290	13	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 N+ +A rs +RK +i eL+ kv+++++e +L + + l+ + Ote100254070011\|100254070011 247 NKQSAARSKERKMRYIGELQSKVQTMQTEKCSLSMQYNLLQRDI 290 9******************************9999988887766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-5	239	299	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.30E-13	244	289	No hit	No description
SuperFamily	SSF57959	1.76E-8	244	291	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-7	247	290	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
MYSESSLPPS WERCSSLCPP NISYSTKPDI AASSNMRGIG PGSSSQEDHE LPLDSSQFSV 60 EISQMHVTSP KDLRHRRTHS DILALLNDIS FDGDLGVLGG LDVLSVSSET KEDLQPEYLV 120 LDKFNLTSES SVSPMKELST SSYVAPALSK KPRGRLQHSQ SLLVVNSFEK EMLKPGSESP 180 SLDEPKTPIS AAKLADLALA DPKRAKRDNI TASVEFALDF NLYSFQLAQS TASLGPNITS 240 SMQIWANKQS AARSKERKMR YIGELQSKVQ TMQTEKCSLS MQYNLLQRDI TGVVSENIEL 300 KLQLQSIEQQ VQLQDALNDA LKKEIQHLKI LTGQAAPDGQ APPHIPPAYG GANQQYHTNN 360 NAAQPLSHHQ FRQHQLDQFH PRQLLLH

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

MYSESSLPPS WERCSSLCPP NISYSTKPDI AASSNMRGIG PGSSSQEDHE LPLDSSQFSV  60
EISQMHVTSP KDLRHRRTHS DILALLNDIS FDGDLGVLGG LDVLSVSSET KEDLQPEYLV  120
LDKFNLTSES SVSPMKELST SSYVAPALSK KPRGRLQHSQ SLLVVNSFEK EMLKPGSESP  180
SLDEPKTPIS AAKLADLALA DPKRAKRDNI TASVEFALDF NLYSFQLAQS TASLGPNITS  240
SMQIWANKQS AARSKERKMR YIGELQSKVQ TMQTEKCSLS MQYNLLQRDI TGVVSENIEL  300
KLQLQSIEQQ VQLQDALNDA LKKEIQHLKI LTGQAAPDGQ APPHIPPAYG GANQQYHTNN  360
NAAQPLSHHQ FRQHQLDQFH PRQLLLH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028108344.1	1e-103	probable transcription factor PosF21
Refseq	XP_028108345.1	1e-103	probable transcription factor PosF21
Refseq	XP_028108346.1	1e-103	probable transcription factor PosF21
TrEMBL	A0A4D8XNJ8	1e-115	A0A4D8XNJ8_SALSN; Uncharacterized protein
STRING	Migut.G01348.1.p	1e-101	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA20447	2	3