PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100252090061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 327aa    MW: 36124.4 Da    PI: 7.8216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100252090061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.33.3e-122685256
                           AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtae.........eAakaaiaarkklege 56
                                  ++ GVr+++ +grWvAeI+d      ++ r +lg+f+t            Aa+a+++a+++l+g+
  Ote100252090061|100252090061 26 KFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTXXxxxxxxxxxXAARAYDKAARQLRGA 85
                                  899******.7*********....4456**********66999*******************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.6E-262698IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-222692IPR001471AP2/ERF domain
PROSITE profilePS5103216.9632692IPR001471AP2/ERF domain
PfamPF008476.7E-62658IPR001471AP2/ERF domain
CDDcd000183.63E-252692No hitNo description
SuperFamilySSF541711.5E-142693IPR016177DNA-binding domain
PRINTSPR003671.9E-72738IPR001471AP2/ERF domain
PRINTSPR003671.9E-77494IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MKQNTSVGED GGVRVRRKTS SRGHHKFVGV RQRPSGRWVA EIKDSLQKVR LWLGTFDTXX  60
XXXXXXXXXX AARAYDKAAR QLRGANARTN FELPQSGPGS ALPDDAEPFS FDAMCRTDEA  120
NTLVGALMSK LFNKKSSRVL IQGSNTYSTR FDGFMAAGTT VAPTSGDRRI DNPTKKAKTL  180
ADCIPDQVYN HAEGSNTEKI DVVTCQKVNQ VGPDSSFEWL GAEPQSDWQP RMMSHVDMDP  240
FLINASKGCT WPTMDMVYNC NPLSEVIAIN NKRENEVQVN AASSSSWSPL PPLDGKYGYQ  300
DSNSNWVNSA NIGWESELHC VVPSVLS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851986.17e-88PREDICTED: ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A4D8YLP21e-129A0A4D8YLP2_SALSN; EREBP-like factor
STRINGMigut.F00403.1.p3e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819