PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100250190031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 257aa    MW: 28446.9 Da    PI: 8.9188
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100250190031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10142189455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Ote100250190031|100250190031 142 SHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 189
                                   8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.03E-9136193No hitNo description
SuperFamilySSF474598.24E-18136206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-18138208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.726138188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-8142189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-10144194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MDPQGTAAMM NDGAVYNFAE IWPGFQVNAA AASYGLGLDP MVRDQRSNHS SPNHNSRKRR  60
EDDESLKEGA XXXXXXXXXX XXXXXVTSKG DTKRLKAVGS NGNRESKTEG EGKAADSSAK  120
PSEPSKQDYI HVRARRGQAT DSHSLAERAR REKISERMRI LQDLVPGCNK VIGKALVLDE  180
IINYIQSLQR QVEFLSMKLE AVNARVGMDG YPSKDFSQQT FDSSGMVYGS QSSREYGRGS  240
SPEWLHMQIG GGFERSS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847721.11e-139PREDICTED: transcription factor bHLH79-like isoform X1
SwissprotQ69WS36e-74BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0H3YBU51e-147A0A0H3YBU5_SALMI; Basic helix-loop-helix transcription factor
TrEMBLA0A4D9BNQ41e-147A0A4D9BNQ4_SALSN; Uncharacterized protein
STRINGMigut.L01368.1.p1e-138(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471